Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk5rap1Q8BTW8 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk5rap1Q8BTW8 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk5rap1Q8BTW8 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Cdk5rap1Q8BTW8 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk5rap1Q8BTW8 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk5rap1Q8BTW8 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.92□□□□□ -0.02
Cdk5rap1Q8BTW8 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.92□□□□□ -0.02
Cdk5rap1Q8BTW8 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.92□□□□□ -0.02
Cdk5rap1Q8BTW8 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.92□□□□□ -0.02
Cdk5rap1Q8BTW8 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Cdk5rap1Q8BTW8 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk5rap1Q8BTW8 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk5rap1Q8BTW8 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk5rap1Q8BTW8 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk5rap1Q8BTW8 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk5rap1Q8BTW8 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.92□□□□□ -0.02
Cdk5rap1Q8BTW8 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Cdk5rap1Q8BTW8 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk5rap1Q8BTW8 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk5rap1Q8BTW8 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk5rap1Q8BTW8 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk5rap1Q8BTW8 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk5rap1Q8BTW8 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdk5rap1Q8BTW8 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdk5rap1Q8BTW8 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Cdk5rap1Q8BTW8 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdk5rap1Q8BTW8 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdk5rap1Q8BTW8 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdk5rap1Q8BTW8 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
Cdk5rap1Q8BTW8 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdk5rap1Q8BTW8 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdk5rap1Q8BTW8 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdk5rap1Q8BTW8 Gm15358-201ENSMUST00000119249 520 ntBASIC14.91□□□□□ -0.02
Cdk5rap1Q8BTW8 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.91□□□□□ -0.02
Cdk5rap1Q8BTW8 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.91□□□□□ -0.02
Cdk5rap1Q8BTW8 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdk5rap1Q8BTW8 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdk5rap1Q8BTW8 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdk5rap1Q8BTW8 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdk5rap1Q8BTW8 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdk5rap1Q8BTW8 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdk5rap1Q8BTW8 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Cdk5rap1Q8BTW8 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdk5rap1Q8BTW8 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdk5rap1Q8BTW8 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdk5rap1Q8BTW8 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Cdk5rap1Q8BTW8 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.91□□□□□ -0.02
Cdk5rap1Q8BTW8 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cdk5rap1Q8BTW8 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdk5rap1Q8BTW8 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cdk5rap1Q8BTW8 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Gm14140-201ENSMUST00000119999 995 ntBASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Gm27628-201ENSMUST00000184911 107 ntBASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Gm37153-201ENSMUST00000193637 231 ntBASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk5rap1Q8BTW8 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap1Q8BTW8 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cdk5rap1Q8BTW8 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 119.6 ms