Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf7Q8BTV2 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf7Q8BTV2 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf7Q8BTV2 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf7Q8BTV2 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf7Q8BTV2 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Cpsf7Q8BTV2 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Cpsf7Q8BTV2 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Cpsf7Q8BTV2 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf7Q8BTV2 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.8■□□□□ 0.12
Cpsf7Q8BTV2 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.8■□□□□ 0.12
Cpsf7Q8BTV2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Cpsf7Q8BTV2 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf7Q8BTV2 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf7Q8BTV2 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf7Q8BTV2 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf7Q8BTV2 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf7Q8BTV2 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf7Q8BTV2 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf7Q8BTV2 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf7Q8BTV2 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Cpsf7Q8BTV2 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.8■□□□□ 0.12
Cpsf7Q8BTV2 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Cpsf7Q8BTV2 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf7Q8BTV2 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.8■□□□□ 0.12
Cpsf7Q8BTV2 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf7Q8BTV2 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf7Q8BTV2 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Cpsf7Q8BTV2 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Cpsf7Q8BTV2 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf7Q8BTV2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf7Q8BTV2 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf7Q8BTV2 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf7Q8BTV2 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf7Q8BTV2 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.79■□□□□ 0.12
Cpsf7Q8BTV2 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.79■□□□□ 0.12
Cpsf7Q8BTV2 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf7Q8BTV2 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf7Q8BTV2 Gm10231-201ENSMUST00000181584 441 ntBASIC15.79■□□□□ 0.12
Cpsf7Q8BTV2 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf7Q8BTV2 Gm10175-202ENSMUST00000208752 441 ntBASIC15.79■□□□□ 0.12
Cpsf7Q8BTV2 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.79■□□□□ 0.12
Cpsf7Q8BTV2 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf7Q8BTV2 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf7Q8BTV2 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf7Q8BTV2 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf7Q8BTV2 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Cpsf7Q8BTV2 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf7Q8BTV2 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf7Q8BTV2 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf7Q8BTV2 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpsf7Q8BTV2 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.78■□□□□ 0.12
Cpsf7Q8BTV2 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Cpsf7Q8BTV2 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf7Q8BTV2 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.78■□□□□ 0.12
Cpsf7Q8BTV2 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf7Q8BTV2 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf7Q8BTV2 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf7Q8BTV2 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Cpsf7Q8BTV2 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf7Q8BTV2 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Cpsf7Q8BTV2 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf7Q8BTV2 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf7Q8BTV2 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf7Q8BTV2 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf7Q8BTV2 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf7Q8BTV2 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf7Q8BTV2 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf7Q8BTV2 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf7Q8BTV2 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf7Q8BTV2 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf7Q8BTV2 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpsf7Q8BTV2 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Cpsf7Q8BTV2 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cpsf7Q8BTV2 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Cpsf7Q8BTV2 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cpsf7Q8BTV2 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.77■□□□□ 0.12
Cpsf7Q8BTV2 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cpsf7Q8BTV2 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cpsf7Q8BTV2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cpsf7Q8BTV2 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cpsf7Q8BTV2 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.77■□□□□ 0.12
Cpsf7Q8BTV2 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cpsf7Q8BTV2 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cpsf7Q8BTV2 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cpsf7Q8BTV2 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cpsf7Q8BTV2 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Cpsf7Q8BTV2 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cpsf7Q8BTV2 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.77■□□□□ 0.11
Cpsf7Q8BTV2 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
Cpsf7Q8BTV2 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cpsf7Q8BTV2 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf7Q8BTV2 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf7Q8BTV2 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Cpsf7Q8BTV2 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf7Q8BTV2 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Cpsf7Q8BTV2 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf7Q8BTV2 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf7Q8BTV2 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cpsf7Q8BTV2 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms