Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Scfd1Q8BRF7 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.96■□□□□ 0.47
Scfd1Q8BRF7 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.96■□□□□ 0.47
Scfd1Q8BRF7 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scfd1Q8BRF7 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.46
Scfd1Q8BRF7 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Scfd1Q8BRF7 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scfd1Q8BRF7 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.95■□□□□ 0.46
Scfd1Q8BRF7 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scfd1Q8BRF7 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.95■□□□□ 0.46
Scfd1Q8BRF7 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Scfd1Q8BRF7 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scfd1Q8BRF7 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Scfd1Q8BRF7 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scfd1Q8BRF7 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scfd1Q8BRF7 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scfd1Q8BRF7 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.95■□□□□ 0.46
Scfd1Q8BRF7 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.95■□□□□ 0.46
Scfd1Q8BRF7 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Scfd1Q8BRF7 Gm25911-201ENSMUST00000157621 56 ntBASIC17.95■□□□□ 0.46
Scfd1Q8BRF7 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.95■□□□□ 0.46
Scfd1Q8BRF7 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scfd1Q8BRF7 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.95■□□□□ 0.46
Scfd1Q8BRF7 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scfd1Q8BRF7 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Scfd1Q8BRF7 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scfd1Q8BRF7 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scfd1Q8BRF7 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scfd1Q8BRF7 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scfd1Q8BRF7 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scfd1Q8BRF7 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scfd1Q8BRF7 Gm5366-201ENSMUST00000215494 1338 ntBASIC17.95■□□□□ 0.46
Scfd1Q8BRF7 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scfd1Q8BRF7 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scfd1Q8BRF7 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scfd1Q8BRF7 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scfd1Q8BRF7 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.94■□□□□ 0.46
Scfd1Q8BRF7 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scfd1Q8BRF7 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scfd1Q8BRF7 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scfd1Q8BRF7 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Scfd1Q8BRF7 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Scfd1Q8BRF7 Gm24513-201ENSMUST00000174964 138 ntBASIC17.94■□□□□ 0.46
Scfd1Q8BRF7 Gm27397-201ENSMUST00000184997 107 ntBASIC17.94■□□□□ 0.46
Scfd1Q8BRF7 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.94■□□□□ 0.46
Scfd1Q8BRF7 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scfd1Q8BRF7 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scfd1Q8BRF7 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Scfd1Q8BRF7 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scfd1Q8BRF7 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.94■□□□□ 0.46
Scfd1Q8BRF7 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.94■□□□□ 0.46
Scfd1Q8BRF7 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.94■□□□□ 0.46
Scfd1Q8BRF7 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scfd1Q8BRF7 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scfd1Q8BRF7 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scfd1Q8BRF7 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scfd1Q8BRF7 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scfd1Q8BRF7 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scfd1Q8BRF7 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scfd1Q8BRF7 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scfd1Q8BRF7 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scfd1Q8BRF7 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.93■□□□□ 0.46
Scfd1Q8BRF7 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.93■□□□□ 0.46
Scfd1Q8BRF7 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scfd1Q8BRF7 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.93■□□□□ 0.46
Scfd1Q8BRF7 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scfd1Q8BRF7 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scfd1Q8BRF7 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scfd1Q8BRF7 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scfd1Q8BRF7 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Scfd1Q8BRF7 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Scfd1Q8BRF7 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scfd1Q8BRF7 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scfd1Q8BRF7 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scfd1Q8BRF7 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scfd1Q8BRF7 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Scfd1Q8BRF7 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scfd1Q8BRF7 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scfd1Q8BRF7 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scfd1Q8BRF7 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scfd1Q8BRF7 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Scfd1Q8BRF7 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scfd1Q8BRF7 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.92■□□□□ 0.46
Scfd1Q8BRF7 Gm43575-201ENSMUST00000196420 516 ntBASIC17.92■□□□□ 0.46
Scfd1Q8BRF7 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.92■□□□□ 0.46
Scfd1Q8BRF7 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.92■□□□□ 0.46
Scfd1Q8BRF7 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.92■□□□□ 0.46
Scfd1Q8BRF7 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Scfd1Q8BRF7 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scfd1Q8BRF7 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Scfd1Q8BRF7 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Scfd1Q8BRF7 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scfd1Q8BRF7 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scfd1Q8BRF7 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scfd1Q8BRF7 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scfd1Q8BRF7 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scfd1Q8BRF7 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.91■□□□□ 0.46
Scfd1Q8BRF7 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scfd1Q8BRF7 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scfd1Q8BRF7 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms