Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Suds3Q8BR65 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Suds3Q8BR65 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Suds3Q8BR65 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Suds3Q8BR65 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Suds3Q8BR65 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Suds3Q8BR65 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.2■□□□□ 0.18
Suds3Q8BR65 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.2■□□□□ 0.18
Suds3Q8BR65 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Suds3Q8BR65 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Suds3Q8BR65 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Suds3Q8BR65 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Suds3Q8BR65 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Suds3Q8BR65 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Suds3Q8BR65 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Suds3Q8BR65 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Suds3Q8BR65 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Suds3Q8BR65 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Suds3Q8BR65 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Suds3Q8BR65 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Suds3Q8BR65 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Suds3Q8BR65 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.2■□□□□ 0.18
Suds3Q8BR65 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Suds3Q8BR65 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Suds3Q8BR65 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Suds3Q8BR65 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Suds3Q8BR65 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Suds3Q8BR65 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.19■□□□□ 0.18
Suds3Q8BR65 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Suds3Q8BR65 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Suds3Q8BR65 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Suds3Q8BR65 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Suds3Q8BR65 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.19■□□□□ 0.18
Suds3Q8BR65 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Suds3Q8BR65 Gm28033-201ENSMUST00000184224 96 ntBASIC16.19■□□□□ 0.18
Suds3Q8BR65 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Suds3Q8BR65 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Suds3Q8BR65 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Suds3Q8BR65 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.19■□□□□ 0.18
Suds3Q8BR65 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.19■□□□□ 0.18
Suds3Q8BR65 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Suds3Q8BR65 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Suds3Q8BR65 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Suds3Q8BR65 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Suds3Q8BR65 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Suds3Q8BR65 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Suds3Q8BR65 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.19■□□□□ 0.18
Suds3Q8BR65 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Suds3Q8BR65 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Suds3Q8BR65 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Suds3Q8BR65 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Suds3Q8BR65 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Suds3Q8BR65 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Suds3Q8BR65 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Suds3Q8BR65 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Suds3Q8BR65 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Suds3Q8BR65 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Suds3Q8BR65 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Suds3Q8BR65 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Suds3Q8BR65 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Suds3Q8BR65 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.18■□□□□ 0.18
Suds3Q8BR65 Gm18669-201ENSMUST00000216049 778 ntBASIC16.18■□□□□ 0.18
Suds3Q8BR65 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.18■□□□□ 0.18
Suds3Q8BR65 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Suds3Q8BR65 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Suds3Q8BR65 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.18■□□□□ 0.18
Suds3Q8BR65 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Suds3Q8BR65 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Suds3Q8BR65 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Suds3Q8BR65 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Suds3Q8BR65 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Suds3Q8BR65 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Suds3Q8BR65 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Suds3Q8BR65 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Suds3Q8BR65 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Suds3Q8BR65 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.17■□□□□ 0.18
Suds3Q8BR65 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Suds3Q8BR65 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Suds3Q8BR65 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Suds3Q8BR65 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Suds3Q8BR65 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Suds3Q8BR65 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.17■□□□□ 0.18
Suds3Q8BR65 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Suds3Q8BR65 Gm27741-201ENSMUST00000185060 237 ntBASIC16.17■□□□□ 0.18
Suds3Q8BR65 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.17■□□□□ 0.18
Suds3Q8BR65 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.17■□□□□ 0.18
Suds3Q8BR65 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Suds3Q8BR65 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Suds3Q8BR65 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Suds3Q8BR65 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Suds3Q8BR65 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Suds3Q8BR65 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Suds3Q8BR65 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Suds3Q8BR65 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Suds3Q8BR65 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Suds3Q8BR65 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Suds3Q8BR65 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Suds3Q8BR65 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.16■□□□□ 0.18
Suds3Q8BR65 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Suds3Q8BR65 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms