Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Smco3Q8BQM7 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.02□□□□□ -0.33
Smco3Q8BQM7 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Smco3Q8BQM7 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smco3Q8BQM7 Gm10602-201ENSMUST00000098239 609 ntBASIC13.02□□□□□ -0.33
Smco3Q8BQM7 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.02□□□□□ -0.33
Smco3Q8BQM7 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smco3Q8BQM7 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smco3Q8BQM7 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smco3Q8BQM7 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Smco3Q8BQM7 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Smco3Q8BQM7 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Smco3Q8BQM7 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smco3Q8BQM7 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smco3Q8BQM7 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smco3Q8BQM7 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smco3Q8BQM7 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smco3Q8BQM7 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Smco3Q8BQM7 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Smco3Q8BQM7 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smco3Q8BQM7 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smco3Q8BQM7 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smco3Q8BQM7 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smco3Q8BQM7 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.01□□□□□ -0.33
Smco3Q8BQM7 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Smco3Q8BQM7 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smco3Q8BQM7 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smco3Q8BQM7 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smco3Q8BQM7 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Smco3Q8BQM7 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smco3Q8BQM7 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smco3Q8BQM7 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smco3Q8BQM7 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smco3Q8BQM7 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Smco3Q8BQM7 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.01□□□□□ -0.33
Smco3Q8BQM7 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smco3Q8BQM7 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smco3Q8BQM7 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smco3Q8BQM7 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smco3Q8BQM7 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smco3Q8BQM7 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Smco3Q8BQM7 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smco3Q8BQM7 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Smco3Q8BQM7 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smco3Q8BQM7 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Smco3Q8BQM7 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smco3Q8BQM7 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smco3Q8BQM7 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Smco3Q8BQM7 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
Smco3Q8BQM7 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smco3Q8BQM7 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smco3Q8BQM7 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smco3Q8BQM7 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Smco3Q8BQM7 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smco3Q8BQM7 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Smco3Q8BQM7 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Smco3Q8BQM7 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smco3Q8BQM7 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Smco3Q8BQM7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smco3Q8BQM7 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Smco3Q8BQM7 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13□□□□□ -0.33
Smco3Q8BQM7 Actl10-202ENSMUST00000226583 1501 ntBASIC13□□□□□ -0.33
Smco3Q8BQM7 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Smco3Q8BQM7 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Smco3Q8BQM7 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smco3Q8BQM7 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smco3Q8BQM7 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smco3Q8BQM7 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC13□□□□□ -0.33
Smco3Q8BQM7 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13□□□□□ -0.33
Smco3Q8BQM7 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Smco3Q8BQM7 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Smco3Q8BQM7 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Smco3Q8BQM7 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smco3Q8BQM7 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Smco3Q8BQM7 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Smco3Q8BQM7 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smco3Q8BQM7 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smco3Q8BQM7 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13□□□□□ -0.33
Smco3Q8BQM7 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smco3Q8BQM7 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smco3Q8BQM7 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Smco3Q8BQM7 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smco3Q8BQM7 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smco3Q8BQM7 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smco3Q8BQM7 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smco3Q8BQM7 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Smco3Q8BQM7 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smco3Q8BQM7 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smco3Q8BQM7 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.99□□□□□ -0.33
Smco3Q8BQM7 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.99□□□□□ -0.33
Smco3Q8BQM7 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smco3Q8BQM7 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Smco3Q8BQM7 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smco3Q8BQM7 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smco3Q8BQM7 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smco3Q8BQM7 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.99□□□□□ -0.33
Smco3Q8BQM7 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Smco3Q8BQM7 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC12.99□□□□□ -0.33
Smco3Q8BQM7 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC12.99□□□□□ -0.33
Smco3Q8BQM7 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms