Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smg1Q8BKX6 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smg1Q8BKX6 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smg1Q8BKX6 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smg1Q8BKX6 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smg1Q8BKX6 Gm43182-201ENSMUST00000199476 2528 ntBASIC13.22□□□□□ -0.29
Smg1Q8BKX6 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Smg1Q8BKX6 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smg1Q8BKX6 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smg1Q8BKX6 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.22□□□□□ -0.29
Smg1Q8BKX6 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smg1Q8BKX6 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Smg1Q8BKX6 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smg1Q8BKX6 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.22□□□□□ -0.29
Smg1Q8BKX6 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smg1Q8BKX6 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smg1Q8BKX6 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smg1Q8BKX6 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smg1Q8BKX6 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smg1Q8BKX6 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.22□□□□□ -0.29
Smg1Q8BKX6 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.22□□□□□ -0.29
Smg1Q8BKX6 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.22□□□□□ -0.29
Smg1Q8BKX6 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.22□□□□□ -0.29
Smg1Q8BKX6 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smg1Q8BKX6 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smg1Q8BKX6 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smg1Q8BKX6 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smg1Q8BKX6 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smg1Q8BKX6 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Smg1Q8BKX6 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smg1Q8BKX6 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smg1Q8BKX6 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smg1Q8BKX6 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smg1Q8BKX6 Gm15358-201ENSMUST00000119249 520 ntBASIC13.21□□□□□ -0.29
Smg1Q8BKX6 Gm15321-201ENSMUST00000121290 288 ntBASIC13.21□□□□□ -0.29
Smg1Q8BKX6 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.21□□□□□ -0.29
Smg1Q8BKX6 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smg1Q8BKX6 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Smg1Q8BKX6 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.21□□□□□ -0.29
Smg1Q8BKX6 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smg1Q8BKX6 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.21□□□□□ -0.29
Smg1Q8BKX6 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.21□□□□□ -0.29
Smg1Q8BKX6 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smg1Q8BKX6 Gm38294-201ENSMUST00000192831 381 ntBASIC13.21□□□□□ -0.29
Smg1Q8BKX6 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Smg1Q8BKX6 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Smg1Q8BKX6 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smg1Q8BKX6 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smg1Q8BKX6 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smg1Q8BKX6 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smg1Q8BKX6 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smg1Q8BKX6 Haglr-201ENSMUST00000100000 2085 ntBASIC13.21□□□□□ -0.29
Smg1Q8BKX6 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smg1Q8BKX6 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Smg1Q8BKX6 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.3
Smg1Q8BKX6 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smg1Q8BKX6 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Smg1Q8BKX6 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Smg1Q8BKX6 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smg1Q8BKX6 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smg1Q8BKX6 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smg1Q8BKX6 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smg1Q8BKX6 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.2□□□□□ -0.3
Smg1Q8BKX6 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smg1Q8BKX6 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Smg1Q8BKX6 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smg1Q8BKX6 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.2□□□□□ -0.3
Smg1Q8BKX6 Syt7-205ENSMUST00000224135 1557 ntBASIC13.2□□□□□ -0.3
Smg1Q8BKX6 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smg1Q8BKX6 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Smg1Q8BKX6 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smg1Q8BKX6 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smg1Q8BKX6 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Smg1Q8BKX6 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smg1Q8BKX6 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smg1Q8BKX6 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smg1Q8BKX6 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smg1Q8BKX6 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smg1Q8BKX6 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smg1Q8BKX6 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smg1Q8BKX6 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smg1Q8BKX6 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smg1Q8BKX6 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.19□□□□□ -0.3
Smg1Q8BKX6 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smg1Q8BKX6 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smg1Q8BKX6 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smg1Q8BKX6 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smg1Q8BKX6 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smg1Q8BKX6 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Smg1Q8BKX6 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.19□□□□□ -0.3
Smg1Q8BKX6 Gm29541-201ENSMUST00000191351 678 ntBASIC13.19□□□□□ -0.3
Smg1Q8BKX6 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Smg1Q8BKX6 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smg1Q8BKX6 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smg1Q8BKX6 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smg1Q8BKX6 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smg1Q8BKX6 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Smg1Q8BKX6 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.19□□□□□ -0.3
Smg1Q8BKX6 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.19□□□□□ -0.3
Smg1Q8BKX6 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms