Protein–RNA interactions for Protein: Q8BKI2

Tnrc6b, Trinucleotide repeat-containing gene 6B protein, mousemouse

Known RBP Predictions only

Length 1,810 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6bQ8BKI2 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnrc6bQ8BKI2 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tnrc6bQ8BKI2 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC20.64■□□□□ 0.9
Tnrc6bQ8BKI2 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC20.64■□□□□ 0.9
Tnrc6bQ8BKI2 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tnrc6bQ8BKI2 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tnrc6bQ8BKI2 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tnrc6bQ8BKI2 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.9
Tnrc6bQ8BKI2 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Tnrc6bQ8BKI2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnrc6bQ8BKI2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnrc6bQ8BKI2 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnrc6bQ8BKI2 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
Tnrc6bQ8BKI2 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnrc6bQ8BKI2 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnrc6bQ8BKI2 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
Tnrc6bQ8BKI2 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Tnrc6bQ8BKI2 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Tnrc6bQ8BKI2 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC20.64■□□□□ 0.89
Tnrc6bQ8BKI2 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnrc6bQ8BKI2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnrc6bQ8BKI2 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC20.64■□□□□ 0.89
Tnrc6bQ8BKI2 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC20.63■□□□□ 0.89
Tnrc6bQ8BKI2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnrc6bQ8BKI2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Tnrc6bQ8BKI2 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Tnrc6bQ8BKI2 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnrc6bQ8BKI2 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnrc6bQ8BKI2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnrc6bQ8BKI2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnrc6bQ8BKI2 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC20.63■□□□□ 0.89
Tnrc6bQ8BKI2 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC20.63■□□□□ 0.89
Tnrc6bQ8BKI2 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Tnrc6bQ8BKI2 Gm27920-201ENSMUST00000183953 96 ntBASIC20.63■□□□□ 0.89
Tnrc6bQ8BKI2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnrc6bQ8BKI2 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tnrc6bQ8BKI2 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnrc6bQ8BKI2 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC20.62■□□□□ 0.89
Tnrc6bQ8BKI2 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnrc6bQ8BKI2 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Tnrc6bQ8BKI2 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnrc6bQ8BKI2 Gm8597-201ENSMUST00000191525 1109 ntBASIC20.62■□□□□ 0.89
Tnrc6bQ8BKI2 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tnrc6bQ8BKI2 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnrc6bQ8BKI2 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnrc6bQ8BKI2 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnrc6bQ8BKI2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnrc6bQ8BKI2 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Tnrc6bQ8BKI2 Gm13015-201ENSMUST00000118674 204 ntBASIC20.62■□□□□ 0.89
Tnrc6bQ8BKI2 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tnrc6bQ8BKI2 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tnrc6bQ8BKI2 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC20.62■□□□□ 0.89
Tnrc6bQ8BKI2 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC20.62■□□□□ 0.89
Tnrc6bQ8BKI2 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tnrc6bQ8BKI2 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnrc6bQ8BKI2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnrc6bQ8BKI2 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnrc6bQ8BKI2 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnrc6bQ8BKI2 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tnrc6bQ8BKI2 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnrc6bQ8BKI2 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnrc6bQ8BKI2 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnrc6bQ8BKI2 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnrc6bQ8BKI2 Gm42934-201ENSMUST00000196920 1345 ntBASIC20.61■□□□□ 0.89
Tnrc6bQ8BKI2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnrc6bQ8BKI2 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnrc6bQ8BKI2 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tnrc6bQ8BKI2 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tnrc6bQ8BKI2 CT009510.1-201ENSMUST00000227972 270 ntBASIC20.61■□□□□ 0.89
Tnrc6bQ8BKI2 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnrc6bQ8BKI2 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Tnrc6bQ8BKI2 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Tnrc6bQ8BKI2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Tnrc6bQ8BKI2 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnrc6bQ8BKI2 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnrc6bQ8BKI2 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC20.61■□□□□ 0.89
Tnrc6bQ8BKI2 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnrc6bQ8BKI2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnrc6bQ8BKI2 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnrc6bQ8BKI2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnrc6bQ8BKI2 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnrc6bQ8BKI2 Gm24158-201ENSMUST00000175263 71 ntBASIC20.6■□□□□ 0.89
Tnrc6bQ8BKI2 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tnrc6bQ8BKI2 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnrc6bQ8BKI2 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tnrc6bQ8BKI2 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Tnrc6bQ8BKI2 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tnrc6bQ8BKI2 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnrc6bQ8BKI2 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tnrc6bQ8BKI2 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tnrc6bQ8BKI2 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnrc6bQ8BKI2 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnrc6bQ8BKI2 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC20.6■□□□□ 0.89
Tnrc6bQ8BKI2 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnrc6bQ8BKI2 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tnrc6bQ8BKI2 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Tnrc6bQ8BKI2 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tnrc6bQ8BKI2 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnrc6bQ8BKI2 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tnrc6bQ8BKI2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms