Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim23Q8BGX0 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim23Q8BGX0 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim23Q8BGX0 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim23Q8BGX0 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim23Q8BGX0 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim23Q8BGX0 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Trim23Q8BGX0 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim23Q8BGX0 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim23Q8BGX0 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trim23Q8BGX0 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim23Q8BGX0 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.19■□□□□ 0.02
Trim23Q8BGX0 Gm18195-201ENSMUST00000207604 706 ntBASIC15.19■□□□□ 0.02
Trim23Q8BGX0 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trim23Q8BGX0 Mzt1-203ENSMUST00000227948 952 ntBASIC15.19■□□□□ 0.02
Trim23Q8BGX0 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.19■□□□□ 0.02
Trim23Q8BGX0 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim23Q8BGX0 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim23Q8BGX0 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim23Q8BGX0 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim23Q8BGX0 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim23Q8BGX0 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim23Q8BGX0 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim23Q8BGX0 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim23Q8BGX0 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim23Q8BGX0 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim23Q8BGX0 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim23Q8BGX0 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim23Q8BGX0 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trim23Q8BGX0 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim23Q8BGX0 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim23Q8BGX0 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Trim23Q8BGX0 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim23Q8BGX0 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Trim23Q8BGX0 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim23Q8BGX0 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim23Q8BGX0 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.18■□□□□ 0.02
Trim23Q8BGX0 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim23Q8BGX0 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim23Q8BGX0 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.18■□□□□ 0.02
Trim23Q8BGX0 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.18■□□□□ 0.02
Trim23Q8BGX0 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Trim23Q8BGX0 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trim23Q8BGX0 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim23Q8BGX0 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim23Q8BGX0 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim23Q8BGX0 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim23Q8BGX0 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Trim23Q8BGX0 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim23Q8BGX0 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim23Q8BGX0 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trim23Q8BGX0 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.18■□□□□ 0.02
Trim23Q8BGX0 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim23Q8BGX0 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim23Q8BGX0 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim23Q8BGX0 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim23Q8BGX0 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim23Q8BGX0 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim23Q8BGX0 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.17■□□□□ 0.02
Trim23Q8BGX0 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
Trim23Q8BGX0 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trim23Q8BGX0 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim23Q8BGX0 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim23Q8BGX0 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trim23Q8BGX0 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim23Q8BGX0 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim23Q8BGX0 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trim23Q8BGX0 Gm8344-201ENSMUST00000119813 856 ntBASIC15.17■□□□□ 0.02
Trim23Q8BGX0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Trim23Q8BGX0 Gm7230-201ENSMUST00000173026 815 ntBASIC15.17■□□□□ 0.02
Trim23Q8BGX0 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim23Q8BGX0 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.17■□□□□ 0.02
Trim23Q8BGX0 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.17■□□□□ 0.02
Trim23Q8BGX0 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim23Q8BGX0 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim23Q8BGX0 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim23Q8BGX0 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim23Q8BGX0 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim23Q8BGX0 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.17■□□□□ 0.02
Trim23Q8BGX0 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.17■□□□□ 0.02
Trim23Q8BGX0 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim23Q8BGX0 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim23Q8BGX0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.17■□□□□ 0.02
Trim23Q8BGX0 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim23Q8BGX0 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trim23Q8BGX0 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.17■□□□□ 0.02
Trim23Q8BGX0 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim23Q8BGX0 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.16■□□□□ 0.02
Trim23Q8BGX0 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim23Q8BGX0 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim23Q8BGX0 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim23Q8BGX0 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim23Q8BGX0 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim23Q8BGX0 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trim23Q8BGX0 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trim23Q8BGX0 Gm10060-201ENSMUST00000212002 111 ntBASIC15.16■□□□□ 0.02
Trim23Q8BGX0 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.16■□□□□ 0.02
Trim23Q8BGX0 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.16■□□□□ 0.02
Trim23Q8BGX0 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim23Q8BGX0 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms