Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim50Q810I2 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Trim50Q810I2 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.36■□□□□ 0.05
Trim50Q810I2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim50Q810I2 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim50Q810I2 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim50Q810I2 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim50Q810I2 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.35■□□□□ 0.05
Trim50Q810I2 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim50Q810I2 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trim50Q810I2 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim50Q810I2 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim50Q810I2 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim50Q810I2 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim50Q810I2 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim50Q810I2 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim50Q810I2 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim50Q810I2 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim50Q810I2 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Trim50Q810I2 Gm15372-201ENSMUST00000120729 834 ntBASIC15.35■□□□□ 0.05
Trim50Q810I2 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.35■□□□□ 0.05
Trim50Q810I2 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim50Q810I2 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Trim50Q810I2 Gm27867-201ENSMUST00000184778 125 ntBASIC15.35■□□□□ 0.05
Trim50Q810I2 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim50Q810I2 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.35■□□□□ 0.05
Trim50Q810I2 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim50Q810I2 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim50Q810I2 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trim50Q810I2 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.35■□□□□ 0.05
Trim50Q810I2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.35■□□□□ 0.05
Trim50Q810I2 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trim50Q810I2 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim50Q810I2 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim50Q810I2 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim50Q810I2 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim50Q810I2 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim50Q810I2 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim50Q810I2 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim50Q810I2 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim50Q810I2 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim50Q810I2 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim50Q810I2 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim50Q810I2 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.34■□□□□ 0.05
Trim50Q810I2 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.34■□□□□ 0.05
Trim50Q810I2 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim50Q810I2 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim50Q810I2 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim50Q810I2 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim50Q810I2 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim50Q810I2 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.34■□□□□ 0.05
Trim50Q810I2 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.34■□□□□ 0.05
Trim50Q810I2 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim50Q810I2 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim50Q810I2 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim50Q810I2 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.34■□□□□ 0.05
Trim50Q810I2 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim50Q810I2 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim50Q810I2 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim50Q810I2 Dancr-204ENSMUST00000132389 2347 ntBASIC15.33■□□□□ 0.05
Trim50Q810I2 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim50Q810I2 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim50Q810I2 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim50Q810I2 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim50Q810I2 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim50Q810I2 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim50Q810I2 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim50Q810I2 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim50Q810I2 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trim50Q810I2 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim50Q810I2 Gm6257-201ENSMUST00000163864 910 ntBASIC15.33■□□□□ 0.04
Trim50Q810I2 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim50Q810I2 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim50Q810I2 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim50Q810I2 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim50Q810I2 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim50Q810I2 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim50Q810I2 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim50Q810I2 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim50Q810I2 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim50Q810I2 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim50Q810I2 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim50Q810I2 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim50Q810I2 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim50Q810I2 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim50Q810I2 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim50Q810I2 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim50Q810I2 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim50Q810I2 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim50Q810I2 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim50Q810I2 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim50Q810I2 Gm9103-201ENSMUST00000119371 405 ntBASIC15.32■□□□□ 0.04
Trim50Q810I2 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.32■□□□□ 0.04
Trim50Q810I2 Gm28033-201ENSMUST00000184224 96 ntBASIC15.32■□□□□ 0.04
Trim50Q810I2 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim50Q810I2 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim50Q810I2 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim50Q810I2 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim50Q810I2 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim50Q810I2 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms