Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3bQ80YF6 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3bQ80YF6 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC13.34□□□□□ -0.27
Upk3bQ80YF6 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Upk3bQ80YF6 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3bQ80YF6 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3bQ80YF6 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3bQ80YF6 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3bQ80YF6 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.34□□□□□ -0.27
Upk3bQ80YF6 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3bQ80YF6 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3bQ80YF6 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
Upk3bQ80YF6 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3bQ80YF6 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3bQ80YF6 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.34□□□□□ -0.27
Upk3bQ80YF6 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3bQ80YF6 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3bQ80YF6 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3bQ80YF6 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.34□□□□□ -0.27
Upk3bQ80YF6 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3bQ80YF6 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3bQ80YF6 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3bQ80YF6 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3bQ80YF6 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3bQ80YF6 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3bQ80YF6 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3bQ80YF6 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Upk3bQ80YF6 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3bQ80YF6 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.27
Upk3bQ80YF6 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Upk3bQ80YF6 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Upk3bQ80YF6 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.33□□□□□ -0.27
Upk3bQ80YF6 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.33□□□□□ -0.27
Upk3bQ80YF6 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Upk3bQ80YF6 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Upk3bQ80YF6 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk3bQ80YF6 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Upk3bQ80YF6 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk3bQ80YF6 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk3bQ80YF6 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Upk3bQ80YF6 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk3bQ80YF6 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk3bQ80YF6 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Upk3bQ80YF6 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Upk3bQ80YF6 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk3bQ80YF6 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.33□□□□□ -0.28
Upk3bQ80YF6 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk3bQ80YF6 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC13.33□□□□□ -0.28
Upk3bQ80YF6 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC13.33□□□□□ -0.28
Upk3bQ80YF6 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Upk3bQ80YF6 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk3bQ80YF6 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Upk3bQ80YF6 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.33□□□□□ -0.28
Upk3bQ80YF6 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk3bQ80YF6 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk3bQ80YF6 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.33□□□□□ -0.28
Upk3bQ80YF6 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk3bQ80YF6 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Upk3bQ80YF6 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.33□□□□□ -0.28
Upk3bQ80YF6 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk3bQ80YF6 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk3bQ80YF6 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3bQ80YF6 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3bQ80YF6 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3bQ80YF6 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3bQ80YF6 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3bQ80YF6 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3bQ80YF6 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3bQ80YF6 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.32□□□□□ -0.28
Upk3bQ80YF6 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3bQ80YF6 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3bQ80YF6 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC13.32□□□□□ -0.28
Upk3bQ80YF6 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3bQ80YF6 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.32□□□□□ -0.28
Upk3bQ80YF6 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC13.32□□□□□ -0.28
Upk3bQ80YF6 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3bQ80YF6 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Upk3bQ80YF6 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3bQ80YF6 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3bQ80YF6 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.32□□□□□ -0.28
Upk3bQ80YF6 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3bQ80YF6 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3bQ80YF6 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Upk3bQ80YF6 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Upk3bQ80YF6 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3bQ80YF6 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Upk3bQ80YF6 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3bQ80YF6 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3bQ80YF6 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3bQ80YF6 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3bQ80YF6 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3bQ80YF6 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3bQ80YF6 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3bQ80YF6 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3bQ80YF6 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Upk3bQ80YF6 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3bQ80YF6 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3bQ80YF6 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3bQ80YF6 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3bQ80YF6 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms