Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vrk1Q80X41 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.01□□□□□ -0.01
Vrk1Q80X41 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.01□□□□□ -0.01
Vrk1Q80X41 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Vrk1Q80X41 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.01□□□□□ -0.01
Vrk1Q80X41 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.01□□□□□ -0.01
Vrk1Q80X41 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vrk1Q80X41 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vrk1Q80X41 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vrk1Q80X41 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vrk1Q80X41 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.01□□□□□ -0.01
Vrk1Q80X41 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vrk1Q80X41 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vrk1Q80X41 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vrk1Q80X41 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vrk1Q80X41 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.01□□□□□ -0.01
Vrk1Q80X41 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vrk1Q80X41 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vrk1Q80X41 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vrk1Q80X41 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vrk1Q80X41 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vrk1Q80X41 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vrk1Q80X41 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vrk1Q80X41 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vrk1Q80X41 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vrk1Q80X41 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Vrk1Q80X41 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15□□□□□ -0.01
Vrk1Q80X41 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15□□□□□ -0.01
Vrk1Q80X41 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Vrk1Q80X41 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vrk1Q80X41 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Vrk1Q80X41 Gm11873-201ENSMUST00000117877 1304 ntBASIC15□□□□□ -0.01
Vrk1Q80X41 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vrk1Q80X41 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15□□□□□ -0.01
Vrk1Q80X41 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Vrk1Q80X41 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vrk1Q80X41 Gm2308-201ENSMUST00000166539 1004 ntBASIC15□□□□□ -0.01
Vrk1Q80X41 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Vrk1Q80X41 Mir3113-201ENSMUST00000175478 76 ntBASIC15□□□□□ -0.01
Vrk1Q80X41 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Vrk1Q80X41 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15□□□□□ -0.01
Vrk1Q80X41 Gm10175-201ENSMUST00000086013 645 ntBASIC15□□□□□ -0.01
Vrk1Q80X41 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Vrk1Q80X41 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vrk1Q80X41 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Vrk1Q80X41 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15□□□□□ -0.01
Vrk1Q80X41 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15□□□□□ -0.01
Vrk1Q80X41 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15□□□□□ -0.01
Vrk1Q80X41 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vrk1Q80X41 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vrk1Q80X41 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vrk1Q80X41 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15□□□□□ -0.01
Vrk1Q80X41 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.99□□□□□ -0.01
Vrk1Q80X41 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vrk1Q80X41 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Vrk1Q80X41 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.99□□□□□ -0.01
Vrk1Q80X41 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vrk1Q80X41 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vrk1Q80X41 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Vrk1Q80X41 Gm8344-201ENSMUST00000119813 856 ntBASIC14.99□□□□□ -0.01
Vrk1Q80X41 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.99□□□□□ -0.01
Vrk1Q80X41 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Vrk1Q80X41 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.99□□□□□ -0.01
Vrk1Q80X41 Gm25911-201ENSMUST00000157621 56 ntBASIC14.99□□□□□ -0.01
Vrk1Q80X41 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vrk1Q80X41 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vrk1Q80X41 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.99□□□□□ -0.01
Vrk1Q80X41 Mir8117-201ENSMUST00000184773 107 ntBASIC14.99□□□□□ -0.01
Vrk1Q80X41 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.99□□□□□ -0.01
Vrk1Q80X41 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vrk1Q80X41 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vrk1Q80X41 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vrk1Q80X41 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vrk1Q80X41 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.99□□□□□ -0.01
Vrk1Q80X41 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Vrk1Q80X41 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vrk1Q80X41 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vrk1Q80X41 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vrk1Q80X41 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.99□□□□□ -0.01
Vrk1Q80X41 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vrk1Q80X41 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vrk1Q80X41 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vrk1Q80X41 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vrk1Q80X41 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vrk1Q80X41 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vrk1Q80X41 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vrk1Q80X41 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vrk1Q80X41 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Vrk1Q80X41 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vrk1Q80X41 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Vrk1Q80X41 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vrk1Q80X41 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vrk1Q80X41 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.98□□□□□ -0.01
Vrk1Q80X41 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vrk1Q80X41 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vrk1Q80X41 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vrk1Q80X41 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vrk1Q80X41 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vrk1Q80X41 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vrk1Q80X41 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms