Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim36Q80WG7 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim36Q80WG7 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.24■□□□□ 0.03
Trim36Q80WG7 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim36Q80WG7 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trim36Q80WG7 Asic1-205ENSMUST00000228185 1818 ntBASIC15.24■□□□□ 0.03
Trim36Q80WG7 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Trim36Q80WG7 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim36Q80WG7 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim36Q80WG7 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim36Q80WG7 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim36Q80WG7 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim36Q80WG7 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trim36Q80WG7 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim36Q80WG7 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim36Q80WG7 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim36Q80WG7 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim36Q80WG7 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim36Q80WG7 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim36Q80WG7 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim36Q80WG7 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trim36Q80WG7 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trim36Q80WG7 Mir770-201ENSMUST00000103252 94 ntBASIC15.23■□□□□ 0.03
Trim36Q80WG7 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.23■□□□□ 0.03
Trim36Q80WG7 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Trim36Q80WG7 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim36Q80WG7 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.23■□□□□ 0.03
Trim36Q80WG7 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Trim36Q80WG7 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trim36Q80WG7 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim36Q80WG7 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim36Q80WG7 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trim36Q80WG7 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.23■□□□□ 0.03
Trim36Q80WG7 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim36Q80WG7 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim36Q80WG7 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim36Q80WG7 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim36Q80WG7 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim36Q80WG7 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim36Q80WG7 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim36Q80WG7 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim36Q80WG7 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim36Q80WG7 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim36Q80WG7 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim36Q80WG7 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim36Q80WG7 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trim36Q80WG7 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.22■□□□□ 0.03
Trim36Q80WG7 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim36Q80WG7 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim36Q80WG7 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim36Q80WG7 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Trim36Q80WG7 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim36Q80WG7 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim36Q80WG7 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim36Q80WG7 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.22■□□□□ 0.03
Trim36Q80WG7 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim36Q80WG7 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim36Q80WG7 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim36Q80WG7 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim36Q80WG7 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trim36Q80WG7 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim36Q80WG7 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Trim36Q80WG7 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trim36Q80WG7 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim36Q80WG7 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim36Q80WG7 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim36Q80WG7 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim36Q80WG7 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trim36Q80WG7 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim36Q80WG7 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.21■□□□□ 0.03
Trim36Q80WG7 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim36Q80WG7 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim36Q80WG7 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim36Q80WG7 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim36Q80WG7 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim36Q80WG7 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trim36Q80WG7 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.21■□□□□ 0.03
Trim36Q80WG7 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim36Q80WG7 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim36Q80WG7 Gm6623-201ENSMUST00000173570 544 ntBASIC15.21■□□□□ 0.03
Trim36Q80WG7 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim36Q80WG7 Gm18115-201ENSMUST00000221209 621 ntBASIC15.21■□□□□ 0.03
Trim36Q80WG7 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.21■□□□□ 0.03
Trim36Q80WG7 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trim36Q80WG7 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim36Q80WG7 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim36Q80WG7 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim36Q80WG7 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim36Q80WG7 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trim36Q80WG7 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim36Q80WG7 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trim36Q80WG7 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim36Q80WG7 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim36Q80WG7 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim36Q80WG7 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim36Q80WG7 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Trim36Q80WG7 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim36Q80WG7 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim36Q80WG7 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim36Q80WG7 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms