Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tnrc18Q80WC3 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tnrc18Q80WC3 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tnrc18Q80WC3 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Tnrc18Q80WC3 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Tnrc18Q80WC3 Gm15321-201ENSMUST00000121290 288 ntBASIC15.51■□□□□ 0.07
Tnrc18Q80WC3 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tnrc18Q80WC3 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.51■□□□□ 0.07
Tnrc18Q80WC3 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tnrc18Q80WC3 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tnrc18Q80WC3 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.51■□□□□ 0.07
Tnrc18Q80WC3 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.51■□□□□ 0.07
Tnrc18Q80WC3 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.51■□□□□ 0.07
Tnrc18Q80WC3 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.51■□□□□ 0.07
Tnrc18Q80WC3 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Tnrc18Q80WC3 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tnrc18Q80WC3 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC15.51■□□□□ 0.07
Tnrc18Q80WC3 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Tnrc18Q80WC3 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Tnrc18Q80WC3 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tnrc18Q80WC3 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.51■□□□□ 0.07
Tnrc18Q80WC3 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tnrc18Q80WC3 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tnrc18Q80WC3 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tnrc18Q80WC3 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tnrc18Q80WC3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Tnrc18Q80WC3 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tnrc18Q80WC3 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tnrc18Q80WC3 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.5■□□□□ 0.07
Tnrc18Q80WC3 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC15.5■□□□□ 0.07
Tnrc18Q80WC3 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tnrc18Q80WC3 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tnrc18Q80WC3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Tnrc18Q80WC3 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tnrc18Q80WC3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tnrc18Q80WC3 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Tnrc18Q80WC3 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tnrc18Q80WC3 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tnrc18Q80WC3 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tnrc18Q80WC3 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tnrc18Q80WC3 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tnrc18Q80WC3 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tnrc18Q80WC3 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Tnrc18Q80WC3 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tnrc18Q80WC3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tnrc18Q80WC3 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tnrc18Q80WC3 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Tnrc18Q80WC3 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Tnrc18Q80WC3 Gm6180-201ENSMUST00000065243 498 ntBASIC15.5■□□□□ 0.07
Tnrc18Q80WC3 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tnrc18Q80WC3 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Tnrc18Q80WC3 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.49■□□□□ 0.07
Tnrc18Q80WC3 Gm14767-201ENSMUST00000121559 586 ntBASIC15.49■□□□□ 0.07
Tnrc18Q80WC3 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC15.49■□□□□ 0.07
Tnrc18Q80WC3 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tnrc18Q80WC3 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Tnrc18Q80WC3 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tnrc18Q80WC3 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Tnrc18Q80WC3 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.49■□□□□ 0.07
Tnrc18Q80WC3 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tnrc18Q80WC3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.49■□□□□ 0.07
Tnrc18Q80WC3 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tnrc18Q80WC3 Gm22189-201ENSMUST00000103822 86 ntBASIC15.49■□□□□ 0.07
Tnrc18Q80WC3 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tnrc18Q80WC3 Gm16215-201ENSMUST00000161990 637 ntBASIC15.49■□□□□ 0.07
Tnrc18Q80WC3 Gm8318-201ENSMUST00000182954 872 ntBASIC15.49■□□□□ 0.07
Tnrc18Q80WC3 Gm28631-201ENSMUST00000190740 334 ntBASIC15.49■□□□□ 0.07
Tnrc18Q80WC3 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Tnrc18Q80WC3 Gm18049-201ENSMUST00000208909 581 ntBASIC15.49■□□□□ 0.07
Tnrc18Q80WC3 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tnrc18Q80WC3 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tnrc18Q80WC3 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tnrc18Q80WC3 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tnrc18Q80WC3 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.48■□□□□ 0.07
Tnrc18Q80WC3 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tnrc18Q80WC3 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.48■□□□□ 0.07
Tnrc18Q80WC3 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tnrc18Q80WC3 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tnrc18Q80WC3 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tnrc18Q80WC3 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tnrc18Q80WC3 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15.48■□□□□ 0.07
Tnrc18Q80WC3 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.48■□□□□ 0.07
Tnrc18Q80WC3 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tnrc18Q80WC3 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Tnrc18Q80WC3 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tnrc18Q80WC3 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tnrc18Q80WC3 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Tnrc18Q80WC3 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Tnrc18Q80WC3 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tnrc18Q80WC3 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.48■□□□□ 0.07
Tnrc18Q80WC3 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tnrc18Q80WC3 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tnrc18Q80WC3 Gm8410-201ENSMUST00000117225 605 ntBASIC15.47■□□□□ 0.07
Tnrc18Q80WC3 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC15.47■□□□□ 0.07
Tnrc18Q80WC3 AC125350.2-201ENSMUST00000224737 727 ntBASIC15.47■□□□□ 0.07
Tnrc18Q80WC3 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.47■□□□□ 0.07
Tnrc18Q80WC3 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tnrc18Q80WC3 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.47■□□□□ 0.07
Tnrc18Q80WC3 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tnrc18Q80WC3 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms