Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpp38Q80UU2 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.71■□□□□ 0.11
Rpp38Q80UU2 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.71■□□□□ 0.11
Rpp38Q80UU2 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpp38Q80UU2 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpp38Q80UU2 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpp38Q80UU2 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpp38Q80UU2 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Rpp38Q80UU2 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Rpp38Q80UU2 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.71■□□□□ 0.11
Rpp38Q80UU2 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpp38Q80UU2 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpp38Q80UU2 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpp38Q80UU2 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpp38Q80UU2 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpp38Q80UU2 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
Rpp38Q80UU2 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rpp38Q80UU2 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rpp38Q80UU2 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpp38Q80UU2 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpp38Q80UU2 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpp38Q80UU2 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpp38Q80UU2 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpp38Q80UU2 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rpp38Q80UU2 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpp38Q80UU2 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Rpp38Q80UU2 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.7■□□□□ 0.1
Rpp38Q80UU2 Gm27459-201ENSMUST00000184860 107 ntBASIC15.7■□□□□ 0.1
Rpp38Q80UU2 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Rpp38Q80UU2 Gm10819-201ENSMUST00000099988 561 ntBASIC15.7■□□□□ 0.1
Rpp38Q80UU2 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpp38Q80UU2 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpp38Q80UU2 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpp38Q80UU2 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpp38Q80UU2 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Rpp38Q80UU2 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpp38Q80UU2 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rpp38Q80UU2 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpp38Q80UU2 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rpp38Q80UU2 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Rpp38Q80UU2 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpp38Q80UU2 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpp38Q80UU2 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Rpp38Q80UU2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rpp38Q80UU2 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpp38Q80UU2 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpp38Q80UU2 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Rpp38Q80UU2 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpp38Q80UU2 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rpp38Q80UU2 Asic1-205ENSMUST00000228185 1818 ntBASIC15.69■□□□□ 0.1
Rpp38Q80UU2 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.69■□□□□ 0.1
Rpp38Q80UU2 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rpp38Q80UU2 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.69■□□□□ 0.1
Rpp38Q80UU2 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.69■□□□□ 0.1
Rpp38Q80UU2 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpp38Q80UU2 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpp38Q80UU2 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpp38Q80UU2 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpp38Q80UU2 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rpp38Q80UU2 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.69■□□□□ 0.1
Rpp38Q80UU2 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rpp38Q80UU2 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpp38Q80UU2 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpp38Q80UU2 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpp38Q80UU2 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.69■□□□□ 0.1
Rpp38Q80UU2 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpp38Q80UU2 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.69■□□□□ 0.1
Rpp38Q80UU2 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpp38Q80UU2 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.69■□□□□ 0.1
Rpp38Q80UU2 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp38Q80UU2 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp38Q80UU2 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp38Q80UU2 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp38Q80UU2 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp38Q80UU2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp38Q80UU2 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp38Q80UU2 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp38Q80UU2 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp38Q80UU2 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.68■□□□□ 0.1
Rpp38Q80UU2 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.68■□□□□ 0.1
Rpp38Q80UU2 Gm15358-201ENSMUST00000119249 520 ntBASIC15.68■□□□□ 0.1
Rpp38Q80UU2 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.68■□□□□ 0.1
Rpp38Q80UU2 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.68■□□□□ 0.1
Rpp38Q80UU2 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Rpp38Q80UU2 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp38Q80UU2 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp38Q80UU2 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp38Q80UU2 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Rpp38Q80UU2 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp38Q80UU2 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp38Q80UU2 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp38Q80UU2 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp38Q80UU2 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpp38Q80UU2 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Rpp38Q80UU2 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
Rpp38Q80UU2 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.68■□□□□ 0.1
Rpp38Q80UU2 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp38Q80UU2 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp38Q80UU2 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp38Q80UU2 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms