Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm5364-201ENSMUST00000216789 889 ntBASIC15.43■□□□□ 0.06
Pcdh19Q80TF3 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh19Q80TF3 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh19Q80TF3 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh19Q80TF3 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh19Q80TF3 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Pcdh19Q80TF3 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh19Q80TF3 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Pcdh19Q80TF3 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh19Q80TF3 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh19Q80TF3 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.43■□□□□ 0.06
Pcdh19Q80TF3 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh19Q80TF3 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh19Q80TF3 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh19Q80TF3 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.42■□□□□ 0.06
Pcdh19Q80TF3 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh19Q80TF3 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh19Q80TF3 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh19Q80TF3 Gm13036-201ENSMUST00000117799 748 ntBASIC15.42■□□□□ 0.06
Pcdh19Q80TF3 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.42■□□□□ 0.06
Pcdh19Q80TF3 Gm27646-201ENSMUST00000183989 110 ntBASIC15.42■□□□□ 0.06
Pcdh19Q80TF3 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.42■□□□□ 0.06
Pcdh19Q80TF3 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh19Q80TF3 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh19Q80TF3 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh19Q80TF3 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh19Q80TF3 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh19Q80TF3 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh19Q80TF3 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh19Q80TF3 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh19Q80TF3 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh19Q80TF3 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.42■□□□□ 0.06
Pcdh19Q80TF3 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh19Q80TF3 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh19Q80TF3 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Pcdh19Q80TF3 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh19Q80TF3 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Pcdh19Q80TF3 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.41■□□□□ 0.06
Pcdh19Q80TF3 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh19Q80TF3 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh19Q80TF3 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh19Q80TF3 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh19Q80TF3 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh19Q80TF3 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Pcdh19Q80TF3 Gm19164-201ENSMUST00000210667 640 ntBASIC15.41■□□□□ 0.06
Pcdh19Q80TF3 Psmb5-202ENSMUST00000227257 622 ntBASIC15.41■□□□□ 0.06
Pcdh19Q80TF3 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh19Q80TF3 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Pcdh19Q80TF3 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh19Q80TF3 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Pcdh19Q80TF3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh19Q80TF3 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.41■□□□□ 0.06
Pcdh19Q80TF3 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh19Q80TF3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Pcdh19Q80TF3 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.41■□□□□ 0.06
Pcdh19Q80TF3 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh19Q80TF3 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh19Q80TF3 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
Pcdh19Q80TF3 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Pcdh19Q80TF3 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Pcdh19Q80TF3 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh19Q80TF3 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh19Q80TF3 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh19Q80TF3 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh19Q80TF3 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh19Q80TF3 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh19Q80TF3 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh19Q80TF3 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh19Q80TF3 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh19Q80TF3 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.4■□□□□ 0.06
Pcdh19Q80TF3 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.4■□□□□ 0.06
Pcdh19Q80TF3 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh19Q80TF3 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh19Q80TF3 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh19Q80TF3 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh19Q80TF3 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh19Q80TF3 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh19Q80TF3 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh19Q80TF3 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh19Q80TF3 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh19Q80TF3 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh19Q80TF3 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh19Q80TF3 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Pcdh19Q80TF3 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh19Q80TF3 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh19Q80TF3 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Pcdh19Q80TF3 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh19Q80TF3 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh19Q80TF3 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.39■□□□□ 0.06
Pcdh19Q80TF3 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh19Q80TF3 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh19Q80TF3 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh19Q80TF3 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Pcdh19Q80TF3 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh19Q80TF3 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh19Q80TF3 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh19Q80TF3 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh19Q80TF3 Gm11764-201ENSMUST00000120221 623 ntBASIC15.39■□□□□ 0.05
Pcdh19Q80TF3 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.39■□□□□ 0.05
Pcdh19Q80TF3 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms