Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Prpf38bQ80SY5 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf38bQ80SY5 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf38bQ80SY5 Gm27628-201ENSMUST00000184911 107 ntBASIC16.44■□□□□ 0.22
Prpf38bQ80SY5 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf38bQ80SY5 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.44■□□□□ 0.22
Prpf38bQ80SY5 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Prpf38bQ80SY5 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf38bQ80SY5 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf38bQ80SY5 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Prpf38bQ80SY5 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf38bQ80SY5 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf38bQ80SY5 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Prpf38bQ80SY5 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf38bQ80SY5 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf38bQ80SY5 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf38bQ80SY5 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.44■□□□□ 0.22
Prpf38bQ80SY5 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf38bQ80SY5 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf38bQ80SY5 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf38bQ80SY5 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.43■□□□□ 0.22
Prpf38bQ80SY5 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf38bQ80SY5 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf38bQ80SY5 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Prpf38bQ80SY5 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf38bQ80SY5 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf38bQ80SY5 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf38bQ80SY5 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf38bQ80SY5 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Prpf38bQ80SY5 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf38bQ80SY5 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf38bQ80SY5 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf38bQ80SY5 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.43■□□□□ 0.22
Prpf38bQ80SY5 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.43■□□□□ 0.22
Prpf38bQ80SY5 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf38bQ80SY5 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf38bQ80SY5 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf38bQ80SY5 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf38bQ80SY5 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf38bQ80SY5 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf38bQ80SY5 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf38bQ80SY5 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf38bQ80SY5 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf38bQ80SY5 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Prpf38bQ80SY5 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Prpf38bQ80SY5 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf38bQ80SY5 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.43■□□□□ 0.22
Prpf38bQ80SY5 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf38bQ80SY5 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf38bQ80SY5 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf38bQ80SY5 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.42■□□□□ 0.22
Prpf38bQ80SY5 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf38bQ80SY5 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf38bQ80SY5 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf38bQ80SY5 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf38bQ80SY5 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf38bQ80SY5 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf38bQ80SY5 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf38bQ80SY5 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.42■□□□□ 0.22
Prpf38bQ80SY5 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf38bQ80SY5 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf38bQ80SY5 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.42■□□□□ 0.22
Prpf38bQ80SY5 Mir6956-201ENSMUST00000183598 62 ntBASIC16.42■□□□□ 0.22
Prpf38bQ80SY5 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.42■□□□□ 0.22
Prpf38bQ80SY5 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf38bQ80SY5 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Prpf38bQ80SY5 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf38bQ80SY5 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf38bQ80SY5 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf38bQ80SY5 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf38bQ80SY5 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf38bQ80SY5 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.42■□□□□ 0.22
Prpf38bQ80SY5 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Prpf38bQ80SY5 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf38bQ80SY5 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf38bQ80SY5 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Prpf38bQ80SY5 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38bQ80SY5 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38bQ80SY5 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38bQ80SY5 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38bQ80SY5 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38bQ80SY5 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.41■□□□□ 0.22
Prpf38bQ80SY5 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Prpf38bQ80SY5 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Prpf38bQ80SY5 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38bQ80SY5 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38bQ80SY5 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Prpf38bQ80SY5 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38bQ80SY5 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38bQ80SY5 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38bQ80SY5 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.41■□□□□ 0.22
Prpf38bQ80SY5 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.41■□□□□ 0.22
Prpf38bQ80SY5 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC16.41■□□□□ 0.22
Prpf38bQ80SY5 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38bQ80SY5 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.41■□□□□ 0.22
Prpf38bQ80SY5 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Prpf38bQ80SY5 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38bQ80SY5 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38bQ80SY5 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38bQ80SY5 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms