Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh8Q7TSK3 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh8Q7TSK3 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh8Q7TSK3 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh8Q7TSK3 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh8Q7TSK3 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh8Q7TSK3 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh8Q7TSK3 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh8Q7TSK3 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh8Q7TSK3 Gm8000-201ENSMUST00000188378 592 ntBASIC15.51■□□□□ 0.07
Pcdh8Q7TSK3 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.51■□□□□ 0.07
Pcdh8Q7TSK3 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdh8Q7TSK3 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh8Q7TSK3 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh8Q7TSK3 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh8Q7TSK3 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh8Q7TSK3 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh8Q7TSK3 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh8Q7TSK3 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Pcdh8Q7TSK3 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Pcdh8Q7TSK3 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh8Q7TSK3 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh8Q7TSK3 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh8Q7TSK3 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Pcdh8Q7TSK3 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh8Q7TSK3 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh8Q7TSK3 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh8Q7TSK3 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Gm8825-201ENSMUST00000182565 998 ntBASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Gm4518-201ENSMUST00000182638 718 ntBASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Pcdh8Q7TSK3 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh8Q7TSK3 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh8Q7TSK3 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.49■□□□□ 0.07
Pcdh8Q7TSK3 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
Pcdh8Q7TSK3 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Pcdh8Q7TSK3 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh8Q7TSK3 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh8Q7TSK3 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh8Q7TSK3 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Pcdh8Q7TSK3 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh8Q7TSK3 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh8Q7TSK3 Gm7222-201ENSMUST00000117512 906 ntBASIC15.49■□□□□ 0.07
Pcdh8Q7TSK3 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Pcdh8Q7TSK3 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.49■□□□□ 0.07
Pcdh8Q7TSK3 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh8Q7TSK3 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh8Q7TSK3 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.49■□□□□ 0.07
Pcdh8Q7TSK3 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Pcdh8Q7TSK3 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Pcdh8Q7TSK3 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh8Q7TSK3 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh8Q7TSK3 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh8Q7TSK3 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh8Q7TSK3 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh8Q7TSK3 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms