Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3d21Q7TSG5 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3d21Q7TSG5 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3d21Q7TSG5 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3d21Q7TSG5 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3d21Q7TSG5 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3d21Q7TSG5 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.25■□□□□ 0.35
Sh3d21Q7TSG5 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3d21Q7TSG5 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Sh3d21Q7TSG5 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3d21Q7TSG5 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3d21Q7TSG5 Gm15165-201ENSMUST00000118140 502 ntBASIC17.25■□□□□ 0.35
Sh3d21Q7TSG5 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Sh3d21Q7TSG5 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Sh3d21Q7TSG5 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Sh3d21Q7TSG5 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Sh3d21Q7TSG5 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.25■□□□□ 0.35
Sh3d21Q7TSG5 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3d21Q7TSG5 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3d21Q7TSG5 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3d21Q7TSG5 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.25■□□□□ 0.35
Sh3d21Q7TSG5 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3d21Q7TSG5 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3d21Q7TSG5 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3d21Q7TSG5 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Sh3d21Q7TSG5 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.25■□□□□ 0.35
Sh3d21Q7TSG5 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3d21Q7TSG5 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3d21Q7TSG5 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Sh3d21Q7TSG5 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3d21Q7TSG5 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3d21Q7TSG5 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Sh3d21Q7TSG5 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3d21Q7TSG5 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3d21Q7TSG5 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3d21Q7TSG5 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3d21Q7TSG5 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Sh3d21Q7TSG5 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.24■□□□□ 0.35
Sh3d21Q7TSG5 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.24■□□□□ 0.35
Sh3d21Q7TSG5 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.24■□□□□ 0.35
Sh3d21Q7TSG5 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3d21Q7TSG5 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3d21Q7TSG5 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3d21Q7TSG5 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3d21Q7TSG5 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3d21Q7TSG5 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.24■□□□□ 0.35
Sh3d21Q7TSG5 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3d21Q7TSG5 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3d21Q7TSG5 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.23■□□□□ 0.35
Sh3d21Q7TSG5 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3d21Q7TSG5 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Sh3d21Q7TSG5 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Sh3d21Q7TSG5 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3d21Q7TSG5 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.23■□□□□ 0.35
Sh3d21Q7TSG5 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3d21Q7TSG5 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3d21Q7TSG5 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3d21Q7TSG5 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3d21Q7TSG5 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3d21Q7TSG5 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.23■□□□□ 0.35
Sh3d21Q7TSG5 Gm25406-201ENSMUST00000157599 105 ntBASIC17.23■□□□□ 0.35
Sh3d21Q7TSG5 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3d21Q7TSG5 Gm27867-201ENSMUST00000184778 125 ntBASIC17.23■□□□□ 0.35
Sh3d21Q7TSG5 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC17.23■□□□□ 0.35
Sh3d21Q7TSG5 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.23■□□□□ 0.35
Sh3d21Q7TSG5 Gm18669-201ENSMUST00000216049 778 ntBASIC17.23■□□□□ 0.35
Sh3d21Q7TSG5 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3d21Q7TSG5 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Sh3d21Q7TSG5 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3d21Q7TSG5 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3d21Q7TSG5 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3d21Q7TSG5 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3d21Q7TSG5 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3d21Q7TSG5 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3d21Q7TSG5 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3d21Q7TSG5 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3d21Q7TSG5 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3d21Q7TSG5 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3d21Q7TSG5 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Sh3d21Q7TSG5 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3d21Q7TSG5 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.22■□□□□ 0.35
Sh3d21Q7TSG5 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Sh3d21Q7TSG5 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3d21Q7TSG5 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3d21Q7TSG5 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3d21Q7TSG5 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3d21Q7TSG5 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3d21Q7TSG5 Ank2-226ENSMUST00000189368 339 ntBASIC17.22■□□□□ 0.35
Sh3d21Q7TSG5 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.22■□□□□ 0.35
Sh3d21Q7TSG5 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3d21Q7TSG5 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3d21Q7TSG5 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.22■□□□□ 0.35
Sh3d21Q7TSG5 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.22■□□□□ 0.35
Sh3d21Q7TSG5 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3d21Q7TSG5 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3d21Q7TSG5 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3d21Q7TSG5 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3d21Q7TSG5 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3d21Q7TSG5 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Sh3d21Q7TSG5 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms