Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
Rnf139Q7TMV1 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf139Q7TMV1 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf139Q7TMV1 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf139Q7TMV1 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.83■□□□□ 0.28
Rnf139Q7TMV1 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.83■□□□□ 0.28
Rnf139Q7TMV1 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf139Q7TMV1 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf139Q7TMV1 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf139Q7TMV1 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Rnf139Q7TMV1 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf139Q7TMV1 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf139Q7TMV1 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf139Q7TMV1 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf139Q7TMV1 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Rnf139Q7TMV1 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf139Q7TMV1 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Rnf139Q7TMV1 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf139Q7TMV1 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf139Q7TMV1 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Rnf139Q7TMV1 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf139Q7TMV1 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.82■□□□□ 0.28
Rnf139Q7TMV1 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf139Q7TMV1 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.82■□□□□ 0.28
Rnf139Q7TMV1 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.82■□□□□ 0.28
Rnf139Q7TMV1 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf139Q7TMV1 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf139Q7TMV1 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf139Q7TMV1 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf139Q7TMV1 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.82■□□□□ 0.28
Rnf139Q7TMV1 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rnf139Q7TMV1 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf139Q7TMV1 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf139Q7TMV1 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Rnf139Q7TMV1 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf139Q7TMV1 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf139Q7TMV1 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf139Q7TMV1 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rnf139Q7TMV1 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf139Q7TMV1 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf139Q7TMV1 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.81■□□□□ 0.28
Rnf139Q7TMV1 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf139Q7TMV1 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf139Q7TMV1 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf139Q7TMV1 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf139Q7TMV1 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.81■□□□□ 0.28
Rnf139Q7TMV1 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf139Q7TMV1 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf139Q7TMV1 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf139Q7TMV1 Gm4535-201ENSMUST00000182274 558 ntBASIC16.81■□□□□ 0.28
Rnf139Q7TMV1 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.81■□□□□ 0.28
Rnf139Q7TMV1 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf139Q7TMV1 Gm10355-201ENSMUST00000097146 517 ntBASIC16.81■□□□□ 0.28
Rnf139Q7TMV1 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf139Q7TMV1 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf139Q7TMV1 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf139Q7TMV1 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf139Q7TMV1 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf139Q7TMV1 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf139Q7TMV1 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf139Q7TMV1 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf139Q7TMV1 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.81■□□□□ 0.28
Rnf139Q7TMV1 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf139Q7TMV1 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf139Q7TMV1 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf139Q7TMV1 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf139Q7TMV1 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Rnf139Q7TMV1 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.8■□□□□ 0.28
Rnf139Q7TMV1 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf139Q7TMV1 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf139Q7TMV1 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Rnf139Q7TMV1 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.8■□□□□ 0.28
Rnf139Q7TMV1 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.8■□□□□ 0.28
Rnf139Q7TMV1 Gm8344-201ENSMUST00000119813 856 ntBASIC16.8■□□□□ 0.28
Rnf139Q7TMV1 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.8■□□□□ 0.28
Rnf139Q7TMV1 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.8■□□□□ 0.28
Rnf139Q7TMV1 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf139Q7TMV1 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf139Q7TMV1 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf139Q7TMV1 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf139Q7TMV1 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf139Q7TMV1 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf139Q7TMV1 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf139Q7TMV1 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf139Q7TMV1 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf139Q7TMV1 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf139Q7TMV1 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf139Q7TMV1 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf139Q7TMV1 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.8■□□□□ 0.28
Rnf139Q7TMV1 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Rnf139Q7TMV1 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf139Q7TMV1 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf139Q7TMV1 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf139Q7TMV1 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf139Q7TMV1 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Rnf139Q7TMV1 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Rnf139Q7TMV1 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf139Q7TMV1 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf139Q7TMV1 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf139Q7TMV1 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms