Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cspg5Q71M36 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cspg5Q71M36 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.32■□□□□ 0.2
Cspg5Q71M36 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.32■□□□□ 0.2
Cspg5Q71M36 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.32■□□□□ 0.2
Cspg5Q71M36 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cspg5Q71M36 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cspg5Q71M36 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cspg5Q71M36 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cspg5Q71M36 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.32■□□□□ 0.2
Cspg5Q71M36 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cspg5Q71M36 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cspg5Q71M36 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cspg5Q71M36 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cspg5Q71M36 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cspg5Q71M36 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cspg5Q71M36 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cspg5Q71M36 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cspg5Q71M36 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cspg5Q71M36 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cspg5Q71M36 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cspg5Q71M36 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cspg5Q71M36 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.31■□□□□ 0.2
Cspg5Q71M36 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.31■□□□□ 0.2
Cspg5Q71M36 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cspg5Q71M36 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cspg5Q71M36 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cspg5Q71M36 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cspg5Q71M36 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cspg5Q71M36 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cspg5Q71M36 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cspg5Q71M36 Gm4459-201ENSMUST00000118750 468 ntBASIC16.31■□□□□ 0.2
Cspg5Q71M36 Gm14140-201ENSMUST00000119999 995 ntBASIC16.31■□□□□ 0.2
Cspg5Q71M36 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.31■□□□□ 0.2
Cspg5Q71M36 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cspg5Q71M36 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cspg5Q71M36 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cspg5Q71M36 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cspg5Q71M36 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cspg5Q71M36 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cspg5Q71M36 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cspg5Q71M36 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.31■□□□□ 0.2
Cspg5Q71M36 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cspg5Q71M36 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.3■□□□□ 0.2
Cspg5Q71M36 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cspg5Q71M36 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cspg5Q71M36 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cspg5Q71M36 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cspg5Q71M36 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.3■□□□□ 0.2
Cspg5Q71M36 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cspg5Q71M36 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cspg5Q71M36 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cspg5Q71M36 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cspg5Q71M36 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Cspg5Q71M36 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.3■□□□□ 0.2
Cspg5Q71M36 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.3■□□□□ 0.2
Cspg5Q71M36 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.3■□□□□ 0.2
Cspg5Q71M36 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.3■□□□□ 0.2
Cspg5Q71M36 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
Cspg5Q71M36 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.3■□□□□ 0.2
Cspg5Q71M36 Gm27628-201ENSMUST00000184911 107 ntBASIC16.3■□□□□ 0.2
Cspg5Q71M36 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.3■□□□□ 0.2
Cspg5Q71M36 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
Cspg5Q71M36 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cspg5Q71M36 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cspg5Q71M36 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cspg5Q71M36 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cspg5Q71M36 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cspg5Q71M36 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.3■□□□□ 0.2
Cspg5Q71M36 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.3■□□□□ 0.2
Cspg5Q71M36 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cspg5Q71M36 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cspg5Q71M36 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cspg5Q71M36 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cspg5Q71M36 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cspg5Q71M36 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cspg5Q71M36 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cspg5Q71M36 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cspg5Q71M36 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cspg5Q71M36 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cspg5Q71M36 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cspg5Q71M36 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cspg5Q71M36 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cspg5Q71M36 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cspg5Q71M36 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Cspg5Q71M36 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cspg5Q71M36 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Cspg5Q71M36 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cspg5Q71M36 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cspg5Q71M36 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cspg5Q71M36 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cspg5Q71M36 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cspg5Q71M36 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.29■□□□□ 0.2
Cspg5Q71M36 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cspg5Q71M36 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Cspg5Q71M36 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cspg5Q71M36 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cspg5Q71M36 AV026068-213ENSMUST00000223675 1171 ntBASIC16.29■□□□□ 0.2
Cspg5Q71M36 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cspg5Q71M36 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms