Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx58Q6Q899 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx58Q6Q899 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx58Q6Q899 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC19.43■□□□□ 0.7
Ddx58Q6Q899 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx58Q6Q899 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ddx58Q6Q899 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx58Q6Q899 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx58Q6Q899 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ddx58Q6Q899 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ddx58Q6Q899 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ddx58Q6Q899 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ddx58Q6Q899 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC19.42■□□□□ 0.7
Ddx58Q6Q899 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Ddx58Q6Q899 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC19.42■□□□□ 0.7
Ddx58Q6Q899 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ddx58Q6Q899 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC19.42■□□□□ 0.7
Ddx58Q6Q899 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC19.42■□□□□ 0.7
Ddx58Q6Q899 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ddx58Q6Q899 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ddx58Q6Q899 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ddx58Q6Q899 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ddx58Q6Q899 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ddx58Q6Q899 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ddx58Q6Q899 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ddx58Q6Q899 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ddx58Q6Q899 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ddx58Q6Q899 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC19.42■□□□□ 0.7
Ddx58Q6Q899 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ddx58Q6Q899 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Ddx58Q6Q899 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ddx58Q6Q899 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx58Q6Q899 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx58Q6Q899 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Ddx58Q6Q899 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx58Q6Q899 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx58Q6Q899 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx58Q6Q899 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Ddx58Q6Q899 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Ddx58Q6Q899 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx58Q6Q899 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC19.41■□□□□ 0.7
Ddx58Q6Q899 Gm7286-201ENSMUST00000182691 1007 ntBASIC19.41■□□□□ 0.7
Ddx58Q6Q899 Mir8117-201ENSMUST00000184773 107 ntBASIC19.41■□□□□ 0.7
Ddx58Q6Q899 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC19.41■□□□□ 0.7
Ddx58Q6Q899 CT943659.1-201ENSMUST00000215459 326 ntBASIC19.41■□□□□ 0.7
Ddx58Q6Q899 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx58Q6Q899 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx58Q6Q899 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx58Q6Q899 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx58Q6Q899 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC19.41■□□□□ 0.7
Ddx58Q6Q899 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx58Q6Q899 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx58Q6Q899 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx58Q6Q899 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.41■□□□□ 0.7
Ddx58Q6Q899 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx58Q6Q899 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx58Q6Q899 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx58Q6Q899 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx58Q6Q899 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx58Q6Q899 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx58Q6Q899 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx58Q6Q899 Grk6-207ENSMUST00000225925 2769 ntBASIC19.4■□□□□ 0.7
Ddx58Q6Q899 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Ddx58Q6Q899 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx58Q6Q899 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx58Q6Q899 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ddx58Q6Q899 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC19.4■□□□□ 0.7
Ddx58Q6Q899 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx58Q6Q899 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Ddx58Q6Q899 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx58Q6Q899 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC19.4■□□□□ 0.7
Ddx58Q6Q899 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC19.4■□□□□ 0.7
Ddx58Q6Q899 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC19.4■□□□□ 0.7
Ddx58Q6Q899 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx58Q6Q899 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx58Q6Q899 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx58Q6Q899 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx58Q6Q899 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Ddx58Q6Q899 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ddx58Q6Q899 Gm7669-201ENSMUST00000210184 1603 ntBASIC19.4■□□□□ 0.7
Ddx58Q6Q899 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.4■□□□□ 0.7
Ddx58Q6Q899 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx58Q6Q899 Prkcz2-201ENSMUST00000206136 1756 ntBASIC19.39■□□□□ 0.7
Ddx58Q6Q899 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Ddx58Q6Q899 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Ddx58Q6Q899 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
Ddx58Q6Q899 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Ddx58Q6Q899 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx58Q6Q899 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx58Q6Q899 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx58Q6Q899 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC19.39■□□□□ 0.69
Ddx58Q6Q899 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx58Q6Q899 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx58Q6Q899 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx58Q6Q899 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC19.39■□□□□ 0.69
Ddx58Q6Q899 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx58Q6Q899 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx58Q6Q899 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx58Q6Q899 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx58Q6Q899 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms