Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nup98Q6PFD9 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nup98Q6PFD9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nup98Q6PFD9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nup98Q6PFD9 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nup98Q6PFD9 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nup98Q6PFD9 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nup98Q6PFD9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nup98Q6PFD9 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nup98Q6PFD9 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Nup98Q6PFD9 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.39■□□□□ 0.54
Nup98Q6PFD9 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.54
Nup98Q6PFD9 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC18.39■□□□□ 0.54
Nup98Q6PFD9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Nup98Q6PFD9 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Nup98Q6PFD9 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Nup98Q6PFD9 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nup98Q6PFD9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nup98Q6PFD9 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC18.39■□□□□ 0.53
Nup98Q6PFD9 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC18.39■□□□□ 0.53
Nup98Q6PFD9 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nup98Q6PFD9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nup98Q6PFD9 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nup98Q6PFD9 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC18.39■□□□□ 0.53
Nup98Q6PFD9 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nup98Q6PFD9 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup98Q6PFD9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup98Q6PFD9 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Nup98Q6PFD9 Gm2272-201ENSMUST00000194903 582 ntBASIC18.38■□□□□ 0.53
Nup98Q6PFD9 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC18.38■□□□□ 0.53
Nup98Q6PFD9 AC166341.4-201ENSMUST00000220625 123 ntBASIC18.38■□□□□ 0.53
Nup98Q6PFD9 AC139382.1-201ENSMUST00000221402 498 ntBASIC18.38■□□□□ 0.53
Nup98Q6PFD9 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup98Q6PFD9 Nudt18-203ENSMUST00000228768 1578 ntBASIC18.38■□□□□ 0.53
Nup98Q6PFD9 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup98Q6PFD9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup98Q6PFD9 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Nup98Q6PFD9 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup98Q6PFD9 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup98Q6PFD9 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup98Q6PFD9 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup98Q6PFD9 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup98Q6PFD9 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup98Q6PFD9 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Nup98Q6PFD9 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Nup98Q6PFD9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup98Q6PFD9 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup98Q6PFD9 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Nup98Q6PFD9 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC18.37■□□□□ 0.53
Nup98Q6PFD9 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup98Q6PFD9 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC18.37■□□□□ 0.53
Nup98Q6PFD9 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup98Q6PFD9 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC18.37■□□□□ 0.53
Nup98Q6PFD9 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC18.37■□□□□ 0.53
Nup98Q6PFD9 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Nup98Q6PFD9 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup98Q6PFD9 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup98Q6PFD9 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup98Q6PFD9 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC18.37■□□□□ 0.53
Nup98Q6PFD9 CT025555.1-201ENSMUST00000225901 1217 ntBASIC18.37■□□□□ 0.53
Nup98Q6PFD9 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC18.37■□□□□ 0.53
Nup98Q6PFD9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup98Q6PFD9 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC18.37■□□□□ 0.53
Nup98Q6PFD9 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup98Q6PFD9 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup98Q6PFD9 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Nup98Q6PFD9 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC18.37■□□□□ 0.53
Nup98Q6PFD9 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nup98Q6PFD9 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Nup98Q6PFD9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Nup98Q6PFD9 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nup98Q6PFD9 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nup98Q6PFD9 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nup98Q6PFD9 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nup98Q6PFD9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nup98Q6PFD9 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Nup98Q6PFD9 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Nup98Q6PFD9 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC18.36■□□□□ 0.53
Nup98Q6PFD9 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC18.36■□□□□ 0.53
Nup98Q6PFD9 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nup98Q6PFD9 CT030684.1-201ENSMUST00000227292 914 ntBASIC18.36■□□□□ 0.53
Nup98Q6PFD9 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nup98Q6PFD9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nup98Q6PFD9 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC18.36■□□□□ 0.53
Nup98Q6PFD9 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nup98Q6PFD9 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nup98Q6PFD9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nup98Q6PFD9 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nup98Q6PFD9 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.36■□□□□ 0.53
Nup98Q6PFD9 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nup98Q6PFD9 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nup98Q6PFD9 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nup98Q6PFD9 Gm25948-201ENSMUST00000175334 112 ntBASIC18.35■□□□□ 0.53
Nup98Q6PFD9 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nup98Q6PFD9 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nup98Q6PFD9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nup98Q6PFD9 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nup98Q6PFD9 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nup98Q6PFD9 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nup98Q6PFD9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms