Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Snrnp40Q6PE01 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Snrnp40Q6PE01 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Snrnp40Q6PE01 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.81□□□□□ -0.2
Snrnp40Q6PE01 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Snrnp40Q6PE01 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Snrnp40Q6PE01 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Snrnp40Q6PE01 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Snrnp40Q6PE01 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Snrnp40Q6PE01 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snrnp40Q6PE01 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.8□□□□□ -0.2
Snrnp40Q6PE01 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snrnp40Q6PE01 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snrnp40Q6PE01 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snrnp40Q6PE01 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snrnp40Q6PE01 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Snrnp40Q6PE01 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snrnp40Q6PE01 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snrnp40Q6PE01 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snrnp40Q6PE01 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.8□□□□□ -0.2
Snrnp40Q6PE01 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.8□□□□□ -0.2
Snrnp40Q6PE01 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.8□□□□□ -0.2
Snrnp40Q6PE01 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.8□□□□□ -0.2
Snrnp40Q6PE01 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.8□□□□□ -0.2
Snrnp40Q6PE01 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.8□□□□□ -0.2
Snrnp40Q6PE01 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.8□□□□□ -0.2
Snrnp40Q6PE01 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snrnp40Q6PE01 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.8□□□□□ -0.2
Snrnp40Q6PE01 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.8□□□□□ -0.2
Snrnp40Q6PE01 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Snrnp40Q6PE01 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Snrnp40Q6PE01 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snrnp40Q6PE01 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Snrnp40Q6PE01 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Snrnp40Q6PE01 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Snrnp40Q6PE01 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snrnp40Q6PE01 Gm19439-201ENSMUST00000198195 2273 ntBASIC13.8□□□□□ -0.2
Snrnp40Q6PE01 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snrnp40Q6PE01 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snrnp40Q6PE01 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snrnp40Q6PE01 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.8□□□□□ -0.2
Snrnp40Q6PE01 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Snrnp40Q6PE01 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snrnp40Q6PE01 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snrnp40Q6PE01 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Snrnp40Q6PE01 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snrnp40Q6PE01 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snrnp40Q6PE01 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Snrnp40Q6PE01 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Snrnp40Q6PE01 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Snrnp40Q6PE01 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Snrnp40Q6PE01 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Snrnp40Q6PE01 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Snrnp40Q6PE01 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snrnp40Q6PE01 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Snrnp40Q6PE01 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.79□□□□□ -0.2
Snrnp40Q6PE01 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snrnp40Q6PE01 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.79□□□□□ -0.2
Snrnp40Q6PE01 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.79□□□□□ -0.2
Snrnp40Q6PE01 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Snrnp40Q6PE01 Gm43125-201ENSMUST00000201724 730 ntBASIC13.79□□□□□ -0.2
Snrnp40Q6PE01 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.79□□□□□ -0.2
Snrnp40Q6PE01 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snrnp40Q6PE01 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Snrnp40Q6PE01 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.79□□□□□ -0.2
Snrnp40Q6PE01 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snrnp40Q6PE01 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.79□□□□□ -0.2
Snrnp40Q6PE01 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snrnp40Q6PE01 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snrnp40Q6PE01 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snrnp40Q6PE01 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snrnp40Q6PE01 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snrnp40Q6PE01 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snrnp40Q6PE01 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snrnp40Q6PE01 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snrnp40Q6PE01 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snrnp40Q6PE01 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snrnp40Q6PE01 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snrnp40Q6PE01 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snrnp40Q6PE01 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Snrnp40Q6PE01 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Snrnp40Q6PE01 Gm22175-201ENSMUST00000175007 78 ntBASIC13.78□□□□□ -0.2
Snrnp40Q6PE01 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snrnp40Q6PE01 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Snrnp40Q6PE01 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Snrnp40Q6PE01 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snrnp40Q6PE01 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Snrnp40Q6PE01 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Snrnp40Q6PE01 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snrnp40Q6PE01 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snrnp40Q6PE01 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snrnp40Q6PE01 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snrnp40Q6PE01 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snrnp40Q6PE01 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Snrnp40Q6PE01 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snrnp40Q6PE01 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snrnp40Q6PE01 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snrnp40Q6PE01 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snrnp40Q6PE01 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Snrnp40Q6PE01 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms