Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.36■□□□□ 0.53
Smarcc2Q6PDG5 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcc2Q6PDG5 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcc2Q6PDG5 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.36■□□□□ 0.53
Smarcc2Q6PDG5 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.36■□□□□ 0.53
Smarcc2Q6PDG5 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcc2Q6PDG5 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcc2Q6PDG5 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Smarcc2Q6PDG5 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcc2Q6PDG5 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcc2Q6PDG5 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcc2Q6PDG5 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
Smarcc2Q6PDG5 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcc2Q6PDG5 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Smarcc2Q6PDG5 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcc2Q6PDG5 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.35■□□□□ 0.53
Smarcc2Q6PDG5 Gm27459-201ENSMUST00000184860 107 ntBASIC18.35■□□□□ 0.53
Smarcc2Q6PDG5 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcc2Q6PDG5 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcc2Q6PDG5 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcc2Q6PDG5 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.35■□□□□ 0.53
Smarcc2Q6PDG5 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcc2Q6PDG5 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Smarcc2Q6PDG5 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcc2Q6PDG5 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Smarcc2Q6PDG5 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Smarcc2Q6PDG5 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Smarcc2Q6PDG5 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcc2Q6PDG5 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcc2Q6PDG5 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Smarcc2Q6PDG5 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcc2Q6PDG5 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
Smarcc2Q6PDG5 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcc2Q6PDG5 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcc2Q6PDG5 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcc2Q6PDG5 Gm25406-201ENSMUST00000157599 105 ntBASIC18.34■□□□□ 0.53
Smarcc2Q6PDG5 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcc2Q6PDG5 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcc2Q6PDG5 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcc2Q6PDG5 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.34■□□□□ 0.53
Smarcc2Q6PDG5 Asic1-205ENSMUST00000228185 1818 ntBASIC18.34■□□□□ 0.53
Smarcc2Q6PDG5 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Smarcc2Q6PDG5 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcc2Q6PDG5 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcc2Q6PDG5 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcc2Q6PDG5 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcc2Q6PDG5 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smarcc2Q6PDG5 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Smarcc2Q6PDG5 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Smarcc2Q6PDG5 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smarcc2Q6PDG5 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
Smarcc2Q6PDG5 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smarcc2Q6PDG5 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Smarcc2Q6PDG5 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smarcc2Q6PDG5 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smarcc2Q6PDG5 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smarcc2Q6PDG5 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcc2Q6PDG5 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Smarcc2Q6PDG5 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcc2Q6PDG5 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.33■□□□□ 0.52
Smarcc2Q6PDG5 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.33■□□□□ 0.52
Smarcc2Q6PDG5 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.33■□□□□ 0.52
Smarcc2Q6PDG5 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
Smarcc2Q6PDG5 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcc2Q6PDG5 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcc2Q6PDG5 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcc2Q6PDG5 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcc2Q6PDG5 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcc2Q6PDG5 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Smarcc2Q6PDG5 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Smarcc2Q6PDG5 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcc2Q6PDG5 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcc2Q6PDG5 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcc2Q6PDG5 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcc2Q6PDG5 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcc2Q6PDG5 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcc2Q6PDG5 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.32■□□□□ 0.52
Smarcc2Q6PDG5 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcc2Q6PDG5 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.32■□□□□ 0.52
Smarcc2Q6PDG5 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.32■□□□□ 0.52
Smarcc2Q6PDG5 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.32■□□□□ 0.52
Smarcc2Q6PDG5 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcc2Q6PDG5 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcc2Q6PDG5 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcc2Q6PDG5 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcc2Q6PDG5 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcc2Q6PDG5 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcc2Q6PDG5 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Smarcc2Q6PDG5 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcc2Q6PDG5 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcc2Q6PDG5 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC18.32■□□□□ 0.52
Smarcc2Q6PDG5 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcc2Q6PDG5 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcc2Q6PDG5 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcc2Q6PDG5 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcc2Q6PDG5 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcc2Q6PDG5 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.31■□□□□ 0.52
Smarcc2Q6PDG5 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcc2Q6PDG5 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcc2Q6PDG5 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms