Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd3Q6P9Z1 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd3Q6P9Z1 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd3Q6P9Z1 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd3Q6P9Z1 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd3Q6P9Z1 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd3Q6P9Z1 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd3Q6P9Z1 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd3Q6P9Z1 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd3Q6P9Z1 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd3Q6P9Z1 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd3Q6P9Z1 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.49□□□□□ -0.09
Smarcd3Q6P9Z1 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd3Q6P9Z1 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd3Q6P9Z1 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd3Q6P9Z1 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Smarcd3Q6P9Z1 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd3Q6P9Z1 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd3Q6P9Z1 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd3Q6P9Z1 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd3Q6P9Z1 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd3Q6P9Z1 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd3Q6P9Z1 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.48□□□□□ -0.09
Smarcd3Q6P9Z1 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd3Q6P9Z1 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.48□□□□□ -0.09
Smarcd3Q6P9Z1 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Smarcd3Q6P9Z1 Gm43799-201ENSMUST00000201845 579 ntBASIC14.48□□□□□ -0.09
Smarcd3Q6P9Z1 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.48□□□□□ -0.09
Smarcd3Q6P9Z1 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Smarcd3Q6P9Z1 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd3Q6P9Z1 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
Smarcd3Q6P9Z1 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Smarcd3Q6P9Z1 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd3Q6P9Z1 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd3Q6P9Z1 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.48□□□□□ -0.09
Smarcd3Q6P9Z1 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd3Q6P9Z1 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd3Q6P9Z1 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd3Q6P9Z1 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Smarcd3Q6P9Z1 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd3Q6P9Z1 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Smarcd3Q6P9Z1 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Smarcd3Q6P9Z1 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.48□□□□□ -0.09
Smarcd3Q6P9Z1 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Smarcd3Q6P9Z1 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smarcd3Q6P9Z1 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Smarcd3Q6P9Z1 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd3Q6P9Z1 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd3Q6P9Z1 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd3Q6P9Z1 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Smarcd3Q6P9Z1 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.47□□□□□ -0.09
Smarcd3Q6P9Z1 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.47□□□□□ -0.09
Smarcd3Q6P9Z1 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd3Q6P9Z1 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd3Q6P9Z1 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd3Q6P9Z1 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd3Q6P9Z1 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Smarcd3Q6P9Z1 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.47□□□□□ -0.09
Smarcd3Q6P9Z1 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd3Q6P9Z1 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Smarcd3Q6P9Z1 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd3Q6P9Z1 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd3Q6P9Z1 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.47□□□□□ -0.09
Smarcd3Q6P9Z1 Gm37722-201ENSMUST00000193757 208 ntBASIC14.47□□□□□ -0.09
Smarcd3Q6P9Z1 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.47□□□□□ -0.09
Smarcd3Q6P9Z1 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.47□□□□□ -0.09
Smarcd3Q6P9Z1 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Smarcd3Q6P9Z1 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd3Q6P9Z1 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd3Q6P9Z1 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd3Q6P9Z1 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd3Q6P9Z1 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.47□□□□□ -0.09
Smarcd3Q6P9Z1 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd3Q6P9Z1 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd3Q6P9Z1 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smarcd3Q6P9Z1 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcd3Q6P9Z1 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcd3Q6P9Z1 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcd3Q6P9Z1 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcd3Q6P9Z1 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcd3Q6P9Z1 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcd3Q6P9Z1 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.46□□□□□ -0.09
Smarcd3Q6P9Z1 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcd3Q6P9Z1 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcd3Q6P9Z1 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcd3Q6P9Z1 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcd3Q6P9Z1 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcd3Q6P9Z1 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcd3Q6P9Z1 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Smarcd3Q6P9Z1 Gm15565-201ENSMUST00000118890 427 ntBASIC14.46□□□□□ -0.09
Smarcd3Q6P9Z1 Gm21559-201ENSMUST00000220638 855 ntBASIC14.46□□□□□ -0.09
Smarcd3Q6P9Z1 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcd3Q6P9Z1 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcd3Q6P9Z1 Gm8587-201ENSMUST00000076538 843 ntBASIC14.46□□□□□ -0.09
Smarcd3Q6P9Z1 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcd3Q6P9Z1 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smarcd3Q6P9Z1 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Smarcd3Q6P9Z1 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Smarcd3Q6P9Z1 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Smarcd3Q6P9Z1 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms