Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac4Q6NZM9 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Hdac4Q6NZM9 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac4Q6NZM9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac4Q6NZM9 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac4Q6NZM9 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.61■□□□□ 0.41
Hdac4Q6NZM9 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.61■□□□□ 0.41
Hdac4Q6NZM9 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Hdac4Q6NZM9 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac4Q6NZM9 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.61■□□□□ 0.41
Hdac4Q6NZM9 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Hdac4Q6NZM9 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac4Q6NZM9 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac4Q6NZM9 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac4Q6NZM9 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac4Q6NZM9 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac4Q6NZM9 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac4Q6NZM9 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac4Q6NZM9 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Hdac4Q6NZM9 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac4Q6NZM9 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Hdac4Q6NZM9 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac4Q6NZM9 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac4Q6NZM9 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac4Q6NZM9 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac4Q6NZM9 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac4Q6NZM9 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
Hdac4Q6NZM9 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac4Q6NZM9 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
Hdac4Q6NZM9 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Hdac4Q6NZM9 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac4Q6NZM9 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac4Q6NZM9 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac4Q6NZM9 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Hdac4Q6NZM9 Gm12497-201ENSMUST00000138778 237 ntBASIC17.6■□□□□ 0.41
Hdac4Q6NZM9 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Hdac4Q6NZM9 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.6■□□□□ 0.41
Hdac4Q6NZM9 Gm7506-201ENSMUST00000207758 815 ntBASIC17.6■□□□□ 0.41
Hdac4Q6NZM9 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac4Q6NZM9 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac4Q6NZM9 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Hdac4Q6NZM9 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Hdac4Q6NZM9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac4Q6NZM9 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac4Q6NZM9 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Hdac4Q6NZM9 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac4Q6NZM9 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac4Q6NZM9 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac4Q6NZM9 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac4Q6NZM9 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Hdac4Q6NZM9 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Hdac4Q6NZM9 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac4Q6NZM9 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac4Q6NZM9 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac4Q6NZM9 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.59■□□□□ 0.41
Hdac4Q6NZM9 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac4Q6NZM9 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac4Q6NZM9 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac4Q6NZM9 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.59■□□□□ 0.41
Hdac4Q6NZM9 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.59■□□□□ 0.41
Hdac4Q6NZM9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac4Q6NZM9 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.59■□□□□ 0.41
Hdac4Q6NZM9 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac4Q6NZM9 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac4Q6NZM9 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac4Q6NZM9 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Hdac4Q6NZM9 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac4Q6NZM9 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac4Q6NZM9 Gm4459-201ENSMUST00000118750 468 ntBASIC17.59■□□□□ 0.41
Hdac4Q6NZM9 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.59■□□□□ 0.41
Hdac4Q6NZM9 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.59■□□□□ 0.41
Hdac4Q6NZM9 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac4Q6NZM9 Gm18669-201ENSMUST00000216049 778 ntBASIC17.59■□□□□ 0.41
Hdac4Q6NZM9 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac4Q6NZM9 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac4Q6NZM9 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Hdac4Q6NZM9 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Hdac4Q6NZM9 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac4Q6NZM9 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Hdac4Q6NZM9 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac4Q6NZM9 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac4Q6NZM9 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac4Q6NZM9 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac4Q6NZM9 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hdac4Q6NZM9 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hdac4Q6NZM9 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hdac4Q6NZM9 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hdac4Q6NZM9 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hdac4Q6NZM9 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Hdac4Q6NZM9 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hdac4Q6NZM9 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Hdac4Q6NZM9 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.58■□□□□ 0.4
Hdac4Q6NZM9 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hdac4Q6NZM9 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Hdac4Q6NZM9 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hdac4Q6NZM9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hdac4Q6NZM9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hdac4Q6NZM9 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hdac4Q6NZM9 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hdac4Q6NZM9 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms