Protein–RNA interactions for Protein: Q6NS82

Retreg2, Reticulophagy regulator 2, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg2Q6NS82 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retreg2Q6NS82 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.94■□□□□ 0.3
Retreg2Q6NS82 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.94■□□□□ 0.3
Retreg2Q6NS82 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retreg2Q6NS82 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retreg2Q6NS82 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.94■□□□□ 0.3
Retreg2Q6NS82 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retreg2Q6NS82 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.94■□□□□ 0.3
Retreg2Q6NS82 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retreg2Q6NS82 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retreg2Q6NS82 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Retreg2Q6NS82 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retreg2Q6NS82 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retreg2Q6NS82 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retreg2Q6NS82 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retreg2Q6NS82 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Retreg2Q6NS82 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retreg2Q6NS82 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Retreg2Q6NS82 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.93■□□□□ 0.3
Retreg2Q6NS82 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.93■□□□□ 0.3
Retreg2Q6NS82 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retreg2Q6NS82 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.93■□□□□ 0.3
Retreg2Q6NS82 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retreg2Q6NS82 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retreg2Q6NS82 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Retreg2Q6NS82 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retreg2Q6NS82 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg2Q6NS82 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg2Q6NS82 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg2Q6NS82 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Retreg2Q6NS82 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg2Q6NS82 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg2Q6NS82 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg2Q6NS82 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg2Q6NS82 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg2Q6NS82 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg2Q6NS82 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Retreg2Q6NS82 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg2Q6NS82 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg2Q6NS82 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg2Q6NS82 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg2Q6NS82 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg2Q6NS82 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg2Q6NS82 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg2Q6NS82 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg2Q6NS82 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg2Q6NS82 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg2Q6NS82 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg2Q6NS82 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg2Q6NS82 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg2Q6NS82 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg2Q6NS82 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg2Q6NS82 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retreg2Q6NS82 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retreg2Q6NS82 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retreg2Q6NS82 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retreg2Q6NS82 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Retreg2Q6NS82 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retreg2Q6NS82 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retreg2Q6NS82 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.91■□□□□ 0.3
Retreg2Q6NS82 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retreg2Q6NS82 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retreg2Q6NS82 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retreg2Q6NS82 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retreg2Q6NS82 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retreg2Q6NS82 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.91■□□□□ 0.3
Retreg2Q6NS82 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Retreg2Q6NS82 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.91■□□□□ 0.3
Retreg2Q6NS82 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retreg2Q6NS82 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retreg2Q6NS82 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retreg2Q6NS82 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retreg2Q6NS82 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retreg2Q6NS82 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retreg2Q6NS82 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retreg2Q6NS82 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retreg2Q6NS82 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retreg2Q6NS82 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retreg2Q6NS82 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.9■□□□□ 0.3
Retreg2Q6NS82 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Retreg2Q6NS82 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.9■□□□□ 0.3
Retreg2Q6NS82 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retreg2Q6NS82 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retreg2Q6NS82 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Retreg2Q6NS82 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retreg2Q6NS82 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retreg2Q6NS82 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Retreg2Q6NS82 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retreg2Q6NS82 Gm13312-201ENSMUST00000119631 718 ntBASIC16.9■□□□□ 0.3
Retreg2Q6NS82 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retreg2Q6NS82 Gm44430-201ENSMUST00000203376 995 ntBASIC16.9■□□□□ 0.3
Retreg2Q6NS82 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retreg2Q6NS82 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retreg2Q6NS82 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retreg2Q6NS82 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retreg2Q6NS82 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retreg2Q6NS82 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retreg2Q6NS82 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retreg2Q6NS82 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Retreg2Q6NS82 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms