Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm4Q6IRU2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Tpm4Q6IRU2 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm4Q6IRU2 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.64■□□□□ 0.41
Tpm4Q6IRU2 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm4Q6IRU2 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm4Q6IRU2 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm4Q6IRU2 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Tpm4Q6IRU2 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm4Q6IRU2 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.64■□□□□ 0.41
Tpm4Q6IRU2 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.64■□□□□ 0.41
Tpm4Q6IRU2 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm4Q6IRU2 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Tpm4Q6IRU2 Gm7889-201ENSMUST00000185591 958 ntBASIC17.64■□□□□ 0.41
Tpm4Q6IRU2 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.64■□□□□ 0.41
Tpm4Q6IRU2 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Tpm4Q6IRU2 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm4Q6IRU2 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm4Q6IRU2 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm4Q6IRU2 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm4Q6IRU2 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm4Q6IRU2 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm4Q6IRU2 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm4Q6IRU2 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm4Q6IRU2 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm4Q6IRU2 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Tpm4Q6IRU2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm4Q6IRU2 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Tpm4Q6IRU2 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Tpm4Q6IRU2 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm4Q6IRU2 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm4Q6IRU2 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm4Q6IRU2 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm4Q6IRU2 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm4Q6IRU2 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm4Q6IRU2 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Tpm4Q6IRU2 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Tpm4Q6IRU2 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.63■□□□□ 0.41
Tpm4Q6IRU2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm4Q6IRU2 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Tpm4Q6IRU2 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm4Q6IRU2 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Tpm4Q6IRU2 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm4Q6IRU2 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm4Q6IRU2 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm4Q6IRU2 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm4Q6IRU2 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm4Q6IRU2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm4Q6IRU2 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Tpm4Q6IRU2 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm4Q6IRU2 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm4Q6IRU2 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm4Q6IRU2 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm4Q6IRU2 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm4Q6IRU2 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm4Q6IRU2 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.63■□□□□ 0.41
Tpm4Q6IRU2 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm4Q6IRU2 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tpm4Q6IRU2 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tpm4Q6IRU2 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tpm4Q6IRU2 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tpm4Q6IRU2 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tpm4Q6IRU2 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.62■□□□□ 0.41
Tpm4Q6IRU2 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Tpm4Q6IRU2 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tpm4Q6IRU2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.62■□□□□ 0.41
Tpm4Q6IRU2 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tpm4Q6IRU2 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tpm4Q6IRU2 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tpm4Q6IRU2 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tpm4Q6IRU2 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Tpm4Q6IRU2 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Tpm4Q6IRU2 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tpm4Q6IRU2 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.62■□□□□ 0.41
Tpm4Q6IRU2 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tpm4Q6IRU2 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tpm4Q6IRU2 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Tpm4Q6IRU2 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tpm4Q6IRU2 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tpm4Q6IRU2 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tpm4Q6IRU2 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tpm4Q6IRU2 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tpm4Q6IRU2 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tpm4Q6IRU2 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.61■□□□□ 0.41
Tpm4Q6IRU2 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tpm4Q6IRU2 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Tpm4Q6IRU2 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Tpm4Q6IRU2 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tpm4Q6IRU2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.61■□□□□ 0.41
Tpm4Q6IRU2 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tpm4Q6IRU2 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.61■□□□□ 0.41
Tpm4Q6IRU2 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tpm4Q6IRU2 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tpm4Q6IRU2 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tpm4Q6IRU2 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tpm4Q6IRU2 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tpm4Q6IRU2 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tpm4Q6IRU2 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Tpm4Q6IRU2 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tpm4Q6IRU2 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms