Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six2Q62232 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Six2Q62232 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six2Q62232 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six2Q62232 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.78■□□□□ 0.28
Six2Q62232 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.77■□□□□ 0.28
Six2Q62232 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.77■□□□□ 0.28
Six2Q62232 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Six2Q62232 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.77■□□□□ 0.28
Six2Q62232 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Six2Q62232 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.77■□□□□ 0.28
Six2Q62232 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Six2Q62232 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Six2Q62232 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Six2Q62232 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Six2Q62232 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Six2Q62232 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.77■□□□□ 0.28
Six2Q62232 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
Six2Q62232 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Six2Q62232 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Six2Q62232 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Six2Q62232 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Six2Q62232 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Six2Q62232 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Six2Q62232 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Six2Q62232 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Six2Q62232 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Six2Q62232 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.77■□□□□ 0.27
Six2Q62232 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six2Q62232 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six2Q62232 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Six2Q62232 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
Six2Q62232 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Six2Q62232 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Six2Q62232 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six2Q62232 Gm4459-201ENSMUST00000118750 468 ntBASIC16.76■□□□□ 0.27
Six2Q62232 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.76■□□□□ 0.27
Six2Q62232 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six2Q62232 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Six2Q62232 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Six2Q62232 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.76■□□□□ 0.27
Six2Q62232 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.76■□□□□ 0.27
Six2Q62232 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six2Q62232 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Six2Q62232 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six2Q62232 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Six2Q62232 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Six2Q62232 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Six2Q62232 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six2Q62232 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Six2Q62232 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six2Q62232 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Six2Q62232 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six2Q62232 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six2Q62232 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Six2Q62232 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Six2Q62232 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Six2Q62232 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Six2Q62232 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.75■□□□□ 0.27
Six2Q62232 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Six2Q62232 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Six2Q62232 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Six2Q62232 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Six2Q62232 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Six2Q62232 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Six2Q62232 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Six2Q62232 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Six2Q62232 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Six2Q62232 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Six2Q62232 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Six2Q62232 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Six2Q62232 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Six2Q62232 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Six2Q62232 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.74■□□□□ 0.27
Six2Q62232 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Six2Q62232 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Six2Q62232 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Six2Q62232 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.74■□□□□ 0.27
Six2Q62232 Gm14859-201ENSMUST00000117752 357 ntBASIC16.74■□□□□ 0.27
Six2Q62232 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Six2Q62232 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.74■□□□□ 0.27
Six2Q62232 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Six2Q62232 Gm17807-201ENSMUST00000186869 298 ntBASIC16.74■□□□□ 0.27
Six2Q62232 Gm18622-201ENSMUST00000219361 595 ntBASIC16.74■□□□□ 0.27
Six2Q62232 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Six2Q62232 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Six2Q62232 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Six2Q62232 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Six2Q62232 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Six2Q62232 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Six2Q62232 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Six2Q62232 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Six2Q62232 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Six2Q62232 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Six2Q62232 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Six2Q62232 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Six2Q62232 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Six2Q62232 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Six2Q62232 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Six2Q62232 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms