Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ctr9Q62018 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ctr9Q62018 Gm43598-201ENSMUST00000202482 2479 ntBASIC18.54■□□□□ 0.56
Ctr9Q62018 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ctr9Q62018 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ctr9Q62018 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ctr9Q62018 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Ctr9Q62018 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ctr9Q62018 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Ctr9Q62018 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ctr9Q62018 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ctr9Q62018 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.53■□□□□ 0.56
Ctr9Q62018 AV026068-213ENSMUST00000223675 1171 ntBASIC18.53■□□□□ 0.56
Ctr9Q62018 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ctr9Q62018 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ctr9Q62018 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ctr9Q62018 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ctr9Q62018 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ctr9Q62018 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ctr9Q62018 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.53■□□□□ 0.56
Ctr9Q62018 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.53■□□□□ 0.56
Ctr9Q62018 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ctr9Q62018 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.53■□□□□ 0.56
Ctr9Q62018 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ctr9Q62018 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ctr9Q62018 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ctr9Q62018 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Ctr9Q62018 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ctr9Q62018 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ctr9Q62018 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ctr9Q62018 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Ctr9Q62018 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ctr9Q62018 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.52■□□□□ 0.56
Ctr9Q62018 Gm27525-201ENSMUST00000184465 107 ntBASIC18.52■□□□□ 0.56
Ctr9Q62018 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.52■□□□□ 0.56
Ctr9Q62018 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.52■□□□□ 0.56
Ctr9Q62018 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ctr9Q62018 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ctr9Q62018 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ctr9Q62018 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ctr9Q62018 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ctr9Q62018 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ctr9Q62018 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ctr9Q62018 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.52■□□□□ 0.55
Ctr9Q62018 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ctr9Q62018 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.52■□□□□ 0.55
Ctr9Q62018 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.52■□□□□ 0.55
Ctr9Q62018 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ctr9Q62018 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Ctr9Q62018 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ctr9Q62018 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.51■□□□□ 0.55
Ctr9Q62018 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Ctr9Q62018 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Ctr9Q62018 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.51■□□□□ 0.55
Ctr9Q62018 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ctr9Q62018 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ctr9Q62018 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Ctr9Q62018 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ctr9Q62018 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Ctr9Q62018 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.51■□□□□ 0.55
Ctr9Q62018 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.51■□□□□ 0.55
Ctr9Q62018 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC18.51■□□□□ 0.55
Ctr9Q62018 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ctr9Q62018 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.51■□□□□ 0.55
Ctr9Q62018 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ctr9Q62018 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Ctr9Q62018 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ctr9Q62018 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Ctr9Q62018 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ctr9Q62018 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ctr9Q62018 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ctr9Q62018 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ctr9Q62018 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ctr9Q62018 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ctr9Q62018 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ctr9Q62018 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ctr9Q62018 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ctr9Q62018 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ctr9Q62018 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ctr9Q62018 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.5■□□□□ 0.55
Ctr9Q62018 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ctr9Q62018 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Ctr9Q62018 Gm7222-201ENSMUST00000117512 906 ntBASIC18.5■□□□□ 0.55
Ctr9Q62018 Gm8344-201ENSMUST00000119813 856 ntBASIC18.5■□□□□ 0.55
Ctr9Q62018 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ctr9Q62018 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ctr9Q62018 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Ctr9Q62018 Gm18206-201ENSMUST00000207027 926 ntBASIC18.5■□□□□ 0.55
Ctr9Q62018 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ctr9Q62018 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ctr9Q62018 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ctr9Q62018 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Ctr9Q62018 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ctr9Q62018 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ctr9Q62018 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ctr9Q62018 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
Ctr9Q62018 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ctr9Q62018 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ctr9Q62018 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ctr9Q62018 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms