Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Notch3Q61982 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Notch3Q61982 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Notch3Q61982 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Notch3Q61982 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Notch3Q61982 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Notch3Q61982 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Notch3Q61982 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Notch3Q61982 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Notch3Q61982 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Notch3Q61982 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Notch3Q61982 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Notch3Q61982 Gm14140-201ENSMUST00000119999 995 ntBASIC12.1□□□□□ -0.47
Notch3Q61982 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.1□□□□□ -0.47
Notch3Q61982 Gm8969-201ENSMUST00000199694 526 ntBASIC12.1□□□□□ -0.47
Notch3Q61982 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Notch3Q61982 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Notch3Q61982 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Notch3Q61982 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Notch3Q61982 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Notch3Q61982 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Notch3Q61982 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Notch3Q61982 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Notch3Q61982 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Notch3Q61982 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Notch3Q61982 Gm36858-201ENSMUST00000194501 2391 ntBASIC12.1□□□□□ -0.47
Notch3Q61982 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Notch3Q61982 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Notch3Q61982 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Notch3Q61982 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC12.1□□□□□ -0.47
Notch3Q61982 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Notch3Q61982 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Notch3Q61982 Gm14822-201ENSMUST00000122247 291 ntBASIC12.1□□□□□ -0.47
Notch3Q61982 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.1□□□□□ -0.47
Notch3Q61982 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.1□□□□□ -0.47
Notch3Q61982 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Notch3Q61982 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Notch3Q61982 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Notch3Q61982 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Notch3Q61982 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.1□□□□□ -0.47
Notch3Q61982 Gm26596-201ENSMUST00000180464 2655 ntBASIC12.1□□□□□ -0.47
Notch3Q61982 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC12.1□□□□□ -0.47
Notch3Q61982 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Notch3Q61982 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Notch3Q61982 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.09□□□□□ -0.47
Notch3Q61982 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Notch3Q61982 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.09□□□□□ -0.47
Notch3Q61982 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Notch3Q61982 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Notch3Q61982 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Notch3Q61982 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Notch3Q61982 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Notch3Q61982 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Notch3Q61982 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Notch3Q61982 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Notch3Q61982 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Notch3Q61982 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Notch3Q61982 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC12.09□□□□□ -0.47
Notch3Q61982 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Notch3Q61982 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.09□□□□□ -0.47
Notch3Q61982 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Notch3Q61982 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Notch3Q61982 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Notch3Q61982 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Notch3Q61982 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Notch3Q61982 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Notch3Q61982 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Notch3Q61982 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Notch3Q61982 Grk6-207ENSMUST00000225925 2769 ntBASIC12.09□□□□□ -0.47
Notch3Q61982 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Notch3Q61982 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Notch3Q61982 Gm25911-201ENSMUST00000157621 56 ntBASIC12.09□□□□□ -0.47
Notch3Q61982 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Notch3Q61982 AC154757.1-201ENSMUST00000228289 336 ntBASIC12.09□□□□□ -0.47
Notch3Q61982 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Notch3Q61982 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Notch3Q61982 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Notch3Q61982 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Notch3Q61982 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Notch3Q61982 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Notch3Q61982 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Notch3Q61982 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Notch3Q61982 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Notch3Q61982 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Notch3Q61982 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Notch3Q61982 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Notch3Q61982 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Notch3Q61982 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.47
Notch3Q61982 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Notch3Q61982 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Notch3Q61982 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Notch3Q61982 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Notch3Q61982 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Notch3Q61982 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Notch3Q61982 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Notch3Q61982 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Notch3Q61982 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Notch3Q61982 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC12.08□□□□□ -0.48
Notch3Q61982 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Notch3Q61982 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms