Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Gli3Q61602 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gli3Q61602 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gli3Q61602 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
Gli3Q61602 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gli3Q61602 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gli3Q61602 Gm20445-201ENSMUST00000061905 565 ntBASIC21.07■□□□□ 0.96
Gli3Q61602 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Gli3Q61602 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Gli3Q61602 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gli3Q61602 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gli3Q61602 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gli3Q61602 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Gli3Q61602 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gli3Q61602 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Gli3Q61602 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC21.06■□□□□ 0.96
Gli3Q61602 Gm9719-201ENSMUST00000162765 543 ntBASIC21.06■□□□□ 0.96
Gli3Q61602 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC21.06■□□□□ 0.96
Gli3Q61602 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Gli3Q61602 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gli3Q61602 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gli3Q61602 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC21.06■□□□□ 0.96
Gli3Q61602 Gm5320-201ENSMUST00000207163 1519 ntBASIC21.06■□□□□ 0.96
Gli3Q61602 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gli3Q61602 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gli3Q61602 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gli3Q61602 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gli3Q61602 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
Gli3Q61602 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Gli3Q61602 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Gli3Q61602 Gm13392-201ENSMUST00000117708 150 ntBASIC21.06■□□□□ 0.96
Gli3Q61602 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC21.06■□□□□ 0.96
Gli3Q61602 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC21.06■□□□□ 0.96
Gli3Q61602 AC159006.1-201ENSMUST00000226396 258 ntBASIC21.06■□□□□ 0.96
Gli3Q61602 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Gli3Q61602 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
Gli3Q61602 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gli3Q61602 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC21.05■□□□□ 0.96
Gli3Q61602 Gm5303-201ENSMUST00000117943 1252 ntBASIC21.05■□□□□ 0.96
Gli3Q61602 Ighv8-7-201ENSMUST00000194349 297 ntBASIC21.05■□□□□ 0.96
Gli3Q61602 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC21.05■□□□□ 0.96
Gli3Q61602 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC21.05■□□□□ 0.96
Gli3Q61602 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gli3Q61602 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gli3Q61602 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Gli3Q61602 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Gli3Q61602 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gli3Q61602 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Gli3Q61602 Gm11841-201ENSMUST00000117060 1963 ntBASIC21.05■□□□□ 0.96
Gli3Q61602 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC21.04■□□□□ 0.96
Gli3Q61602 Gm8096-201ENSMUST00000209921 1591 ntBASIC21.04■□□□□ 0.96
Gli3Q61602 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gli3Q61602 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gli3Q61602 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC21.04■□□□□ 0.96
Gli3Q61602 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gli3Q61602 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gli3Q61602 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gli3Q61602 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gli3Q61602 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gli3Q61602 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Gli3Q61602 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gli3Q61602 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gli3Q61602 Gm9200-201ENSMUST00000118513 1354 ntBASIC21.03■□□□□ 0.96
Gli3Q61602 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gli3Q61602 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Gli3Q61602 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gli3Q61602 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Gli3Q61602 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Gli3Q61602 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Gli3Q61602 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Gli3Q61602 AC162801.1-201ENSMUST00000220612 198 ntBASIC21.03■□□□□ 0.96
Gli3Q61602 CT030657.3-201ENSMUST00000222707 1200 ntBASIC21.03■□□□□ 0.96
Gli3Q61602 Shd-206ENSMUST00000225145 998 ntBASIC21.03■□□□□ 0.96
Gli3Q61602 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gli3Q61602 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gli3Q61602 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gli3Q61602 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gli3Q61602 Gm7669-201ENSMUST00000210184 1603 ntBASIC21.02■□□□□ 0.96
Gli3Q61602 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gli3Q61602 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gli3Q61602 Gm12742-201ENSMUST00000117326 410 ntBASIC21.02■□□□□ 0.96
Gli3Q61602 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gli3Q61602 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Gli3Q61602 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gli3Q61602 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Gli3Q61602 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Gli3Q61602 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Gli3Q61602 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Gli3Q61602 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
Gli3Q61602 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Gli3Q61602 Gm4984-201ENSMUST00000115987 360 ntBASIC21.02■□□□□ 0.95
Gli3Q61602 Gm15806-201ENSMUST00000120696 955 ntBASIC21.02■□□□□ 0.95
Gli3Q61602 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Gli3Q61602 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Gli3Q61602 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC21.02■□□□□ 0.95
Gli3Q61602 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC21.02■□□□□ 0.95
Gli3Q61602 Klk2-ps-201ENSMUST00000205342 571 ntBASIC21.02■□□□□ 0.95
Gli3Q61602 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Gli3Q61602 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gli3Q61602 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms