Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccne1Q61457 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccne1Q61457 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Ccne1Q61457 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Ccne1Q61457 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccne1Q61457 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC20.41■□□□□ 0.86
Ccne1Q61457 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccne1Q61457 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccne1Q61457 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
Ccne1Q61457 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ccne1Q61457 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Ccne1Q61457 Mir1895-201ENSMUST00000122615 79 ntBASIC20.4■□□□□ 0.86
Ccne1Q61457 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccne1Q61457 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccne1Q61457 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC20.4■□□□□ 0.86
Ccne1Q61457 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccne1Q61457 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ccne1Q61457 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccne1Q61457 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccne1Q61457 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccne1Q61457 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccne1Q61457 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Ccne1Q61457 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ccne1Q61457 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Ccne1Q61457 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ccne1Q61457 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccne1Q61457 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccne1Q61457 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccne1Q61457 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccne1Q61457 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
Ccne1Q61457 Gm6226-201ENSMUST00000117765 1146 ntBASIC20.39■□□□□ 0.85
Ccne1Q61457 Gm13365-201ENSMUST00000121188 973 ntBASIC20.39■□□□□ 0.85
Ccne1Q61457 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ccne1Q61457 Gm7286-201ENSMUST00000182691 1007 ntBASIC20.39■□□□□ 0.85
Ccne1Q61457 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC20.39■□□□□ 0.85
Ccne1Q61457 Gm45612-201ENSMUST00000211320 160 ntBASIC20.39■□□□□ 0.85
Ccne1Q61457 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC20.39■□□□□ 0.85
Ccne1Q61457 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccne1Q61457 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
Ccne1Q61457 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccne1Q61457 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccne1Q61457 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccne1Q61457 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Ccne1Q61457 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccne1Q61457 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Ccne1Q61457 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ccne1Q61457 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccne1Q61457 Gm28265-201ENSMUST00000188201 2319 ntBASIC20.38■□□□□ 0.85
Ccne1Q61457 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ccne1Q61457 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccne1Q61457 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccne1Q61457 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccne1Q61457 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccne1Q61457 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccne1Q61457 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccne1Q61457 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccne1Q61457 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ccne1Q61457 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccne1Q61457 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ccne1Q61457 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Ccne1Q61457 Gm27301-201ENSMUST00000184012 127 ntBASIC20.38■□□□□ 0.85
Ccne1Q61457 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC20.38■□□□□ 0.85
Ccne1Q61457 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccne1Q61457 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccne1Q61457 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccne1Q61457 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccne1Q61457 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccne1Q61457 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccne1Q61457 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccne1Q61457 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccne1Q61457 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccne1Q61457 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccne1Q61457 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccne1Q61457 Gm13332-201ENSMUST00000120451 1398 ntBASIC20.37■□□□□ 0.85
Ccne1Q61457 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccne1Q61457 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccne1Q61457 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccne1Q61457 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Ccne1Q61457 AC139382.1-201ENSMUST00000221402 498 ntBASIC20.37■□□□□ 0.85
Ccne1Q61457 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Ccne1Q61457 Gm29361-201ENSMUST00000183323 2000 ntBASIC20.37■□□□□ 0.85
Ccne1Q61457 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccne1Q61457 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccne1Q61457 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccne1Q61457 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccne1Q61457 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccne1Q61457 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ccne1Q61457 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccne1Q61457 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccne1Q61457 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccne1Q61457 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccne1Q61457 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccne1Q61457 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccne1Q61457 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC20.36■□□□□ 0.85
Ccne1Q61457 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC20.36■□□□□ 0.85
Ccne1Q61457 Gm20553-201ENSMUST00000204205 844 ntBASIC20.36■□□□□ 0.85
Ccne1Q61457 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC20.36■□□□□ 0.85
Ccne1Q61457 Thap2-203ENSMUST00000218989 527 ntBASIC20.36■□□□□ 0.85
Ccne1Q61457 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccne1Q61457 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms