Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clcn4Q61418 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clcn4Q61418 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Clcn4Q61418 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clcn4Q61418 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Clcn4Q61418 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.54□□□□□ -0.08
Clcn4Q61418 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Clcn4Q61418 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Clcn4Q61418 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Clcn4Q61418 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.54□□□□□ -0.08
Clcn4Q61418 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Clcn4Q61418 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.54□□□□□ -0.08
Clcn4Q61418 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Clcn4Q61418 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Clcn4Q61418 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Clcn4Q61418 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.54□□□□□ -0.08
Clcn4Q61418 Gm6623-201ENSMUST00000173570 544 ntBASIC14.54□□□□□ -0.08
Clcn4Q61418 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Clcn4Q61418 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Clcn4Q61418 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.54□□□□□ -0.08
Clcn4Q61418 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.54□□□□□ -0.08
Clcn4Q61418 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Clcn4Q61418 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Clcn4Q61418 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Clcn4Q61418 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Clcn4Q61418 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Clcn4Q61418 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.54□□□□□ -0.08
Clcn4Q61418 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Clcn4Q61418 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Clcn4Q61418 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Clcn4Q61418 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Clcn4Q61418 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clcn4Q61418 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clcn4Q61418 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Clcn4Q61418 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Clcn4Q61418 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clcn4Q61418 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clcn4Q61418 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clcn4Q61418 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clcn4Q61418 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clcn4Q61418 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Clcn4Q61418 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clcn4Q61418 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Clcn4Q61418 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.53□□□□□ -0.08
Clcn4Q61418 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Clcn4Q61418 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Clcn4Q61418 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.53□□□□□ -0.08
Clcn4Q61418 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Clcn4Q61418 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clcn4Q61418 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clcn4Q61418 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clcn4Q61418 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clcn4Q61418 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clcn4Q61418 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clcn4Q61418 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clcn4Q61418 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Clcn4Q61418 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Clcn4Q61418 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Clcn4Q61418 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Clcn4Q61418 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Clcn4Q61418 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Clcn4Q61418 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Clcn4Q61418 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Clcn4Q61418 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.52□□□□□ -0.08
Clcn4Q61418 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Clcn4Q61418 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Clcn4Q61418 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Clcn4Q61418 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Clcn4Q61418 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Clcn4Q61418 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.52□□□□□ -0.09
Clcn4Q61418 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.52□□□□□ -0.09
Clcn4Q61418 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.52□□□□□ -0.09
Clcn4Q61418 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.52□□□□□ -0.09
Clcn4Q61418 Gm36967-201ENSMUST00000193814 266 ntBASIC14.52□□□□□ -0.09
Clcn4Q61418 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.52□□□□□ -0.09
Clcn4Q61418 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Clcn4Q61418 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Clcn4Q61418 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Clcn4Q61418 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Clcn4Q61418 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.52□□□□□ -0.09
Clcn4Q61418 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Clcn4Q61418 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Clcn4Q61418 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Clcn4Q61418 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clcn4Q61418 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clcn4Q61418 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clcn4Q61418 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clcn4Q61418 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Clcn4Q61418 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clcn4Q61418 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clcn4Q61418 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Clcn4Q61418 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clcn4Q61418 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Clcn4Q61418 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clcn4Q61418 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clcn4Q61418 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clcn4Q61418 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clcn4Q61418 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clcn4Q61418 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clcn4Q61418 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms