Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Six4Q61321 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Six4Q61321 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Six4Q61321 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Six4Q61321 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Six4Q61321 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Six4Q61321 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Six4Q61321 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Six4Q61321 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Six4Q61321 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.87■□□□□ 0.13
Six4Q61321 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Six4Q61321 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Six4Q61321 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Six4Q61321 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Six4Q61321 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Six4Q61321 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Six4Q61321 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Six4Q61321 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Six4Q61321 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Six4Q61321 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Six4Q61321 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Six4Q61321 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Six4Q61321 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Six4Q61321 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Six4Q61321 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Six4Q61321 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Six4Q61321 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Six4Q61321 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Six4Q61321 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Six4Q61321 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Six4Q61321 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Six4Q61321 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Six4Q61321 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Six4Q61321 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Six4Q61321 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Six4Q61321 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Six4Q61321 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Six4Q61321 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Six4Q61321 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Six4Q61321 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Six4Q61321 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.86■□□□□ 0.13
Six4Q61321 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Six4Q61321 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Six4Q61321 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Six4Q61321 Gm27741-201ENSMUST00000185060 237 ntBASIC15.86■□□□□ 0.13
Six4Q61321 Gm5864-201ENSMUST00000202263 970 ntBASIC15.86■□□□□ 0.13
Six4Q61321 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Six4Q61321 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Six4Q61321 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Six4Q61321 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Six4Q61321 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.86■□□□□ 0.13
Six4Q61321 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Six4Q61321 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Six4Q61321 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Six4Q61321 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Six4Q61321 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Six4Q61321 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Six4Q61321 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Six4Q61321 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
Six4Q61321 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Six4Q61321 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Six4Q61321 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Six4Q61321 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Six4Q61321 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Six4Q61321 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Six4Q61321 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Six4Q61321 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Six4Q61321 Gm13884-201ENSMUST00000118103 829 ntBASIC15.85■□□□□ 0.13
Six4Q61321 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.85■□□□□ 0.13
Six4Q61321 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.85■□□□□ 0.13
Six4Q61321 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Six4Q61321 Gm27646-201ENSMUST00000183989 110 ntBASIC15.85■□□□□ 0.13
Six4Q61321 Gm6376-201ENSMUST00000209407 580 ntBASIC15.85■□□□□ 0.13
Six4Q61321 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
Six4Q61321 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.85■□□□□ 0.13
Six4Q61321 Rps4l-201ENSMUST00000071745 943 ntBASIC15.85■□□□□ 0.13
Six4Q61321 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.85■□□□□ 0.13
Six4Q61321 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Six4Q61321 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Six4Q61321 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Six4Q61321 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Six4Q61321 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Six4Q61321 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Six4Q61321 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Six4Q61321 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Six4Q61321 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Six4Q61321 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Six4Q61321 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Six4Q61321 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Six4Q61321 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Six4Q61321 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Six4Q61321 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Six4Q61321 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Six4Q61321 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Six4Q61321 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Six4Q61321 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Six4Q61321 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Six4Q61321 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Six4Q61321 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Six4Q61321 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms