Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC22.52■■□□□ 1.2
Ptch1Q61115 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ptch1Q61115 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ptch1Q61115 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ptch1Q61115 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Ptch1Q61115 Gm42934-201ENSMUST00000196920 1345 ntBASIC22.51■■□□□ 1.19
Ptch1Q61115 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ptch1Q61115 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ptch1Q61115 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Ptch1Q61115 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ptch1Q61115 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Ptch1Q61115 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC22.51■■□□□ 1.19
Ptch1Q61115 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Ptch1Q61115 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Ptch1Q61115 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Ptch1Q61115 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Ptch1Q61115 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ptch1Q61115 Gm18766-201ENSMUST00000189811 808 ntBASIC22.51■■□□□ 1.19
Ptch1Q61115 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC22.51■■□□□ 1.19
Ptch1Q61115 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC22.51■■□□□ 1.19
Ptch1Q61115 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ptch1Q61115 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ptch1Q61115 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ptch1Q61115 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ptch1Q61115 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Ptch1Q61115 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Ptch1Q61115 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC22.51■■□□□ 1.19
Ptch1Q61115 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ptch1Q61115 Gm14928-201ENSMUST00000120198 477 ntBASIC22.5■■□□□ 1.19
Ptch1Q61115 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ptch1Q61115 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ptch1Q61115 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Ptch1Q61115 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Ptch1Q61115 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Ptch1Q61115 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Ptch1Q61115 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Ptch1Q61115 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ptch1Q61115 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ptch1Q61115 Gm16026-204ENSMUST00000162652 683 ntBASIC22.49■■□□□ 1.19
Ptch1Q61115 AC160980.1-201ENSMUST00000224136 970 ntBASIC22.49■■□□□ 1.19
Ptch1Q61115 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ptch1Q61115 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ptch1Q61115 Gm25857-201ENSMUST00000082788 129 ntBASIC22.49■■□□□ 1.19
Ptch1Q61115 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Ptch1Q61115 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ptch1Q61115 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC22.49■■□□□ 1.19
Ptch1Q61115 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ptch1Q61115 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ptch1Q61115 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Ptch1Q61115 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ptch1Q61115 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ptch1Q61115 Gm11543-201ENSMUST00000120758 370 ntBASIC22.48■■□□□ 1.19
Ptch1Q61115 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Ptch1Q61115 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC22.48■■□□□ 1.19
Ptch1Q61115 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC22.48■■□□□ 1.19
Ptch1Q61115 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ptch1Q61115 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ptch1Q61115 Gm27533-201ENSMUST00000183800 152 ntBASIC22.48■■□□□ 1.19
Ptch1Q61115 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ptch1Q61115 AL593843.1-201ENSMUST00000195891 145 ntBASIC22.48■■□□□ 1.19
Ptch1Q61115 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ptch1Q61115 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ptch1Q61115 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Ptch1Q61115 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC22.48■■□□□ 1.19
Ptch1Q61115 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
Ptch1Q61115 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Ptch1Q61115 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC22.48■■□□□ 1.19
Ptch1Q61115 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Ptch1Q61115 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC22.48■■□□□ 1.19
Ptch1Q61115 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Ptch1Q61115 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Ptch1Q61115 Gm27838-201ENSMUST00000184829 128 ntBASIC22.48■■□□□ 1.19
Ptch1Q61115 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC22.48■■□□□ 1.19
Ptch1Q61115 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Ptch1Q61115 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Ptch1Q61115 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ptch1Q61115 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ptch1Q61115 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Ptch1Q61115 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Ptch1Q61115 Gm24694-201ENSMUST00000180054 110 ntBASIC22.47■■□□□ 1.19
Ptch1Q61115 Gm27663-201ENSMUST00000184839 110 ntBASIC22.47■■□□□ 1.19
Ptch1Q61115 Gm18049-201ENSMUST00000208909 581 ntBASIC22.47■■□□□ 1.19
Ptch1Q61115 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ptch1Q61115 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ptch1Q61115 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ptch1Q61115 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC22.46■■□□□ 1.19
Ptch1Q61115 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ptch1Q61115 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ptch1Q61115 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC22.46■■□□□ 1.19
Ptch1Q61115 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Ptch1Q61115 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ptch1Q61115 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Ptch1Q61115 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Ptch1Q61115 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC22.46■■□□□ 1.19
Ptch1Q61115 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC22.46■■□□□ 1.19
Ptch1Q61115 Gm44344-201ENSMUST00000200287 129 ntBASIC22.46■■□□□ 1.19
Ptch1Q61115 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ptch1Q61115 Gm8839-201ENSMUST00000121279 1645 ntBASIC22.46■■□□□ 1.19
Ptch1Q61115 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ptch1Q61115 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC22.46■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms