Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scarb1Q61009 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scarb1Q61009 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scarb1Q61009 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Scarb1Q61009 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scarb1Q61009 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Scarb1Q61009 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Scarb1Q61009 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.3□□□□□ -0.28
Scarb1Q61009 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scarb1Q61009 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scarb1Q61009 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
Scarb1Q61009 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.3□□□□□ -0.28
Scarb1Q61009 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scarb1Q61009 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scarb1Q61009 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Scarb1Q61009 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scarb1Q61009 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scarb1Q61009 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scarb1Q61009 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
Scarb1Q61009 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scarb1Q61009 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scarb1Q61009 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scarb1Q61009 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scarb1Q61009 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scarb1Q61009 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scarb1Q61009 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.3□□□□□ -0.28
Scarb1Q61009 Otx2os1-204ENSMUST00000227221 751 ntBASIC13.3□□□□□ -0.28
Scarb1Q61009 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Scarb1Q61009 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scarb1Q61009 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Scarb1Q61009 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Scarb1Q61009 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scarb1Q61009 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Scarb1Q61009 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scarb1Q61009 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scarb1Q61009 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Scarb1Q61009 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scarb1Q61009 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scarb1Q61009 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scarb1Q61009 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scarb1Q61009 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scarb1Q61009 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scarb1Q61009 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scarb1Q61009 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scarb1Q61009 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scarb1Q61009 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.29□□□□□ -0.28
Scarb1Q61009 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scarb1Q61009 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scarb1Q61009 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scarb1Q61009 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scarb1Q61009 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scarb1Q61009 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
Scarb1Q61009 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Scarb1Q61009 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.29□□□□□ -0.28
Scarb1Q61009 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC13.29□□□□□ -0.28
Scarb1Q61009 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Scarb1Q61009 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scarb1Q61009 Odf3b-204ENSMUST00000227834 930 ntBASIC13.29□□□□□ -0.28
Scarb1Q61009 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scarb1Q61009 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scarb1Q61009 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scarb1Q61009 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scarb1Q61009 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Scarb1Q61009 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scarb1Q61009 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scarb1Q61009 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scarb1Q61009 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scarb1Q61009 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scarb1Q61009 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.29□□□□□ -0.28
Scarb1Q61009 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Scarb1Q61009 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scarb1Q61009 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Scarb1Q61009 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scarb1Q61009 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scarb1Q61009 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scarb1Q61009 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scarb1Q61009 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scarb1Q61009 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Scarb1Q61009 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scarb1Q61009 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scarb1Q61009 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scarb1Q61009 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Scarb1Q61009 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scarb1Q61009 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.28□□□□□ -0.28
Scarb1Q61009 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scarb1Q61009 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.28□□□□□ -0.28
Scarb1Q61009 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scarb1Q61009 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scarb1Q61009 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scarb1Q61009 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Scarb1Q61009 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scarb1Q61009 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scarb1Q61009 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scarb1Q61009 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scarb1Q61009 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Scarb1Q61009 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scarb1Q61009 Gm15039-201ENSMUST00000118914 875 ntBASIC13.28□□□□□ -0.28
Scarb1Q61009 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scarb1Q61009 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scarb1Q61009 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms