Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.79□□□□□ -0.04
Tnfaip3Q60769 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfaip3Q60769 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfaip3Q60769 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfaip3Q60769 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfaip3Q60769 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.79□□□□□ -0.04
Tnfaip3Q60769 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfaip3Q60769 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.79□□□□□ -0.04
Tnfaip3Q60769 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfaip3Q60769 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.79□□□□□ -0.04
Tnfaip3Q60769 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfaip3Q60769 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfaip3Q60769 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfaip3Q60769 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfaip3Q60769 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfaip3Q60769 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfaip3Q60769 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfaip3Q60769 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfaip3Q60769 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfaip3Q60769 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfaip3Q60769 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfaip3Q60769 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Tnfaip3Q60769 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfaip3Q60769 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfaip3Q60769 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Tnfaip3Q60769 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfaip3Q60769 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfaip3Q60769 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfaip3Q60769 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Tnfaip3Q60769 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfaip3Q60769 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfaip3Q60769 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfaip3Q60769 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.78□□□□□ -0.04
Tnfaip3Q60769 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfaip3Q60769 Gm11780-201ENSMUST00000136880 516 ntBASIC14.78□□□□□ -0.04
Tnfaip3Q60769 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Tnfaip3Q60769 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfaip3Q60769 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.78□□□□□ -0.04
Tnfaip3Q60769 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfaip3Q60769 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfaip3Q60769 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfaip3Q60769 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfaip3Q60769 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfaip3Q60769 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Tnfaip3Q60769 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfaip3Q60769 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfaip3Q60769 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Tnfaip3Q60769 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfaip3Q60769 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfaip3Q60769 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfaip3Q60769 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfaip3Q60769 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfaip3Q60769 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfaip3Q60769 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfaip3Q60769 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.78□□□□□ -0.04
Tnfaip3Q60769 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Tnfaip3Q60769 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfaip3Q60769 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Tnfaip3Q60769 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tnfaip3Q60769 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tnfaip3Q60769 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tnfaip3Q60769 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tnfaip3Q60769 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tnfaip3Q60769 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.77□□□□□ -0.04
Tnfaip3Q60769 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tnfaip3Q60769 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tnfaip3Q60769 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tnfaip3Q60769 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Tnfaip3Q60769 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tnfaip3Q60769 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.77□□□□□ -0.05
Tnfaip3Q60769 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Tnfaip3Q60769 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.77□□□□□ -0.05
Tnfaip3Q60769 Gm7230-201ENSMUST00000173026 815 ntBASIC14.77□□□□□ -0.05
Tnfaip3Q60769 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tnfaip3Q60769 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Tnfaip3Q60769 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.77□□□□□ -0.05
Tnfaip3Q60769 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tnfaip3Q60769 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Tnfaip3Q60769 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.77□□□□□ -0.05
Tnfaip3Q60769 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Tnfaip3Q60769 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.77□□□□□ -0.05
Tnfaip3Q60769 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tnfaip3Q60769 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tnfaip3Q60769 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tnfaip3Q60769 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Tnfaip3Q60769 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.77□□□□□ -0.05
Tnfaip3Q60769 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
Tnfaip3Q60769 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tnfaip3Q60769 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tnfaip3Q60769 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tnfaip3Q60769 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tnfaip3Q60769 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tnfaip3Q60769 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tnfaip3Q60769 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.76□□□□□ -0.05
Tnfaip3Q60769 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Tnfaip3Q60769 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tnfaip3Q60769 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tnfaip3Q60769 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Tnfaip3Q60769 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Tnfaip3Q60769 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms