Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Nr1h4Q60641 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.02■□□□□ -0
Nr1h4Q60641 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC15.02■□□□□ -0
Nr1h4Q60641 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nr1h4Q60641 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nr1h4Q60641 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.02■□□□□ -0
Nr1h4Q60641 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nr1h4Q60641 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Nr1h4Q60641 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nr1h4Q60641 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nr1h4Q60641 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nr1h4Q60641 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nr1h4Q60641 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nr1h4Q60641 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Nr1h4Q60641 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nr1h4Q60641 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nr1h4Q60641 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nr1h4Q60641 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nr1h4Q60641 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nr1h4Q60641 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Nr1h4Q60641 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nr1h4Q60641 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nr1h4Q60641 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nr1h4Q60641 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nr1h4Q60641 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nr1h4Q60641 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nr1h4Q60641 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Nr1h4Q60641 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nr1h4Q60641 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Nr1h4Q60641 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.01□□□□□ -0.01
Nr1h4Q60641 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nr1h4Q60641 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Nr1h4Q60641 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nr1h4Q60641 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nr1h4Q60641 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nr1h4Q60641 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nr1h4Q60641 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nr1h4Q60641 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.01□□□□□ -0.01
Nr1h4Q60641 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nr1h4Q60641 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nr1h4Q60641 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nr1h4Q60641 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nr1h4Q60641 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nr1h4Q60641 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nr1h4Q60641 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nr1h4Q60641 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Nr1h4Q60641 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nr1h4Q60641 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nr1h4Q60641 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nr1h4Q60641 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15□□□□□ -0.01
Nr1h4Q60641 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nr1h4Q60641 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nr1h4Q60641 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nr1h4Q60641 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Nr1h4Q60641 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nr1h4Q60641 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15□□□□□ -0.01
Nr1h4Q60641 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nr1h4Q60641 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15□□□□□ -0.01
Nr1h4Q60641 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nr1h4Q60641 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nr1h4Q60641 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15□□□□□ -0.01
Nr1h4Q60641 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15□□□□□ -0.01
Nr1h4Q60641 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15□□□□□ -0.01
Nr1h4Q60641 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nr1h4Q60641 AC159205.6-201ENSMUST00000224935 887 ntBASIC15□□□□□ -0.01
Nr1h4Q60641 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15□□□□□ -0.01
Nr1h4Q60641 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nr1h4Q60641 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15□□□□□ -0.01
Nr1h4Q60641 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Nr1h4Q60641 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nr1h4Q60641 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nr1h4Q60641 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Nr1h4Q60641 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nr1h4Q60641 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Nr1h4Q60641 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Nr1h4Q60641 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Nr1h4Q60641 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15□□□□□ -0.01
Nr1h4Q60641 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nr1h4Q60641 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nr1h4Q60641 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nr1h4Q60641 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Nr1h4Q60641 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nr1h4Q60641 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nr1h4Q60641 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nr1h4Q60641 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nr1h4Q60641 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nr1h4Q60641 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Nr1h4Q60641 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nr1h4Q60641 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nr1h4Q60641 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Nr1h4Q60641 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nr1h4Q60641 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.99□□□□□ -0.01
Nr1h4Q60641 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.99□□□□□ -0.01
Nr1h4Q60641 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nr1h4Q60641 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nr1h4Q60641 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.99□□□□□ -0.01
Nr1h4Q60641 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.99□□□□□ -0.01
Nr1h4Q60641 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nr1h4Q60641 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nr1h4Q60641 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms