Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim38Q5SZ99 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim38Q5SZ99 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim38Q5SZ99 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim38Q5SZ99 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim38Q5SZ99 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim38Q5SZ99 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim38Q5SZ99 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim38Q5SZ99 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim38Q5SZ99 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.34■□□□□ 0.21
Trim38Q5SZ99 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.34■□□□□ 0.21
Trim38Q5SZ99 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim38Q5SZ99 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim38Q5SZ99 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim38Q5SZ99 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.34■□□□□ 0.21
Trim38Q5SZ99 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Trim38Q5SZ99 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Trim38Q5SZ99 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.34■□□□□ 0.21
Trim38Q5SZ99 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim38Q5SZ99 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim38Q5SZ99 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim38Q5SZ99 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim38Q5SZ99 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim38Q5SZ99 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim38Q5SZ99 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.34■□□□□ 0.21
Trim38Q5SZ99 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim38Q5SZ99 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim38Q5SZ99 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim38Q5SZ99 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim38Q5SZ99 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim38Q5SZ99 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Trim38Q5SZ99 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim38Q5SZ99 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim38Q5SZ99 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim38Q5SZ99 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.33■□□□□ 0.2
Trim38Q5SZ99 Gm9172-201ENSMUST00000212092 954 ntBASIC16.33■□□□□ 0.2
Trim38Q5SZ99 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim38Q5SZ99 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.33■□□□□ 0.2
Trim38Q5SZ99 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim38Q5SZ99 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim38Q5SZ99 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim38Q5SZ99 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim38Q5SZ99 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Trim38Q5SZ99 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
Trim38Q5SZ99 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim38Q5SZ99 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Trim38Q5SZ99 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Trim38Q5SZ99 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim38Q5SZ99 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim38Q5SZ99 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim38Q5SZ99 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim38Q5SZ99 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim38Q5SZ99 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim38Q5SZ99 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim38Q5SZ99 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim38Q5SZ99 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trim38Q5SZ99 Gm7284-201ENSMUST00000131667 944 ntBASIC16.32■□□□□ 0.2
Trim38Q5SZ99 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim38Q5SZ99 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim38Q5SZ99 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim38Q5SZ99 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim38Q5SZ99 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim38Q5SZ99 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.32■□□□□ 0.2
Trim38Q5SZ99 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim38Q5SZ99 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim38Q5SZ99 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim38Q5SZ99 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim38Q5SZ99 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim38Q5SZ99 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim38Q5SZ99 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim38Q5SZ99 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim38Q5SZ99 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.32■□□□□ 0.2
Trim38Q5SZ99 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Trim38Q5SZ99 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim38Q5SZ99 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim38Q5SZ99 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim38Q5SZ99 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim38Q5SZ99 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim38Q5SZ99 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trim38Q5SZ99 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim38Q5SZ99 App-207ENSMUST00000227737 2827 ntBASIC16.31■□□□□ 0.2
Trim38Q5SZ99 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim38Q5SZ99 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.31■□□□□ 0.2
Trim38Q5SZ99 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim38Q5SZ99 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim38Q5SZ99 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.31■□□□□ 0.2
Trim38Q5SZ99 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Trim38Q5SZ99 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trim38Q5SZ99 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.31■□□□□ 0.2
Trim38Q5SZ99 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Trim38Q5SZ99 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.31■□□□□ 0.2
Trim38Q5SZ99 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.31■□□□□ 0.2
Trim38Q5SZ99 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim38Q5SZ99 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim38Q5SZ99 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.31■□□□□ 0.2
Trim38Q5SZ99 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.31■□□□□ 0.2
Trim38Q5SZ99 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim38Q5SZ99 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim38Q5SZ99 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim38Q5SZ99 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms