Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.88■□□□□ 0.61
Vps54Q5SPW0 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps54Q5SPW0 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps54Q5SPW0 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps54Q5SPW0 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps54Q5SPW0 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Vps54Q5SPW0 Gm12350-201ENSMUST00000121208 462 ntBASIC18.88■□□□□ 0.61
Vps54Q5SPW0 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.88■□□□□ 0.61
Vps54Q5SPW0 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Vps54Q5SPW0 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps54Q5SPW0 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Vps54Q5SPW0 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps54Q5SPW0 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Vps54Q5SPW0 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps54Q5SPW0 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps54Q5SPW0 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps54Q5SPW0 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps54Q5SPW0 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps54Q5SPW0 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps54Q5SPW0 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Vps54Q5SPW0 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps54Q5SPW0 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps54Q5SPW0 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps54Q5SPW0 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps54Q5SPW0 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Vps54Q5SPW0 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps54Q5SPW0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps54Q5SPW0 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Vps54Q5SPW0 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Vps54Q5SPW0 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps54Q5SPW0 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Vps54Q5SPW0 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Vps54Q5SPW0 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps54Q5SPW0 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps54Q5SPW0 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Vps54Q5SPW0 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Vps54Q5SPW0 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.87■□□□□ 0.61
Vps54Q5SPW0 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps54Q5SPW0 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps54Q5SPW0 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps54Q5SPW0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps54Q5SPW0 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Vps54Q5SPW0 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Vps54Q5SPW0 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Vps54Q5SPW0 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Vps54Q5SPW0 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps54Q5SPW0 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.86■□□□□ 0.61
Vps54Q5SPW0 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Vps54Q5SPW0 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.86■□□□□ 0.61
Vps54Q5SPW0 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.86■□□□□ 0.61
Vps54Q5SPW0 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps54Q5SPW0 Gm5682-201ENSMUST00000173402 505 ntBASIC18.86■□□□□ 0.61
Vps54Q5SPW0 Mir5126-201ENSMUST00000175513 77 ntBASIC18.86■□□□□ 0.61
Vps54Q5SPW0 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.86■□□□□ 0.61
Vps54Q5SPW0 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.86■□□□□ 0.61
Vps54Q5SPW0 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps54Q5SPW0 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps54Q5SPW0 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps54Q5SPW0 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps54Q5SPW0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Vps54Q5SPW0 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps54Q5SPW0 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
Vps54Q5SPW0 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps54Q5SPW0 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps54Q5SPW0 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vps54Q5SPW0 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps54Q5SPW0 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps54Q5SPW0 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vps54Q5SPW0 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.85■□□□□ 0.61
Vps54Q5SPW0 Gm19164-201ENSMUST00000210667 640 ntBASIC18.85■□□□□ 0.61
Vps54Q5SPW0 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Vps54Q5SPW0 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps54Q5SPW0 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps54Q5SPW0 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps54Q5SPW0 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps54Q5SPW0 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps54Q5SPW0 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC18.84■□□□□ 0.61
Vps54Q5SPW0 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps54Q5SPW0 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps54Q5SPW0 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Vps54Q5SPW0 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps54Q5SPW0 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps54Q5SPW0 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Vps54Q5SPW0 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps54Q5SPW0 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.84■□□□□ 0.61
Vps54Q5SPW0 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.84■□□□□ 0.61
Vps54Q5SPW0 Gm15358-201ENSMUST00000119249 520 ntBASIC18.84■□□□□ 0.61
Vps54Q5SPW0 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.84■□□□□ 0.61
Vps54Q5SPW0 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.84■□□□□ 0.61
Vps54Q5SPW0 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.84■□□□□ 0.61
Vps54Q5SPW0 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
Vps54Q5SPW0 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Vps54Q5SPW0 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps54Q5SPW0 Gm15590-201ENSMUST00000078419 552 ntBASIC18.84■□□□□ 0.61
Vps54Q5SPW0 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps54Q5SPW0 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps54Q5SPW0 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps54Q5SPW0 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps54Q5SPW0 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps54Q5SPW0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms