Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-4Q5R1I0 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav6d-4Q5R1I0 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav6d-4Q5R1I0 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Trav6d-4Q5R1I0 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-4Q5R1I0 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-4Q5R1I0 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trav6d-4Q5R1I0 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-4Q5R1I0 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-4Q5R1I0 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-4Q5R1I0 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-4Q5R1I0 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-4Q5R1I0 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav6d-4Q5R1I0 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav6d-4Q5R1I0 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-4Q5R1I0 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.21□□□□□ -0.29
Trav6d-4Q5R1I0 Gm7222-201ENSMUST00000117512 906 ntBASIC13.21□□□□□ -0.29
Trav6d-4Q5R1I0 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-4Q5R1I0 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-4Q5R1I0 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.21□□□□□ -0.29
Trav6d-4Q5R1I0 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.21□□□□□ -0.29
Trav6d-4Q5R1I0 Gm27646-201ENSMUST00000183989 110 ntBASIC13.21□□□□□ -0.29
Trav6d-4Q5R1I0 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.21□□□□□ -0.29
Trav6d-4Q5R1I0 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
Trav6d-4Q5R1I0 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav6d-4Q5R1I0 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-4Q5R1I0 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-4Q5R1I0 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-4Q5R1I0 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-4Q5R1I0 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-4Q5R1I0 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-4Q5R1I0 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-4Q5R1I0 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav6d-4Q5R1I0 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-4Q5R1I0 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-4Q5R1I0 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.21□□□□□ -0.29
Trav6d-4Q5R1I0 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Trav6d-4Q5R1I0 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6d-4Q5R1I0 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
Trav6d-4Q5R1I0 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6d-4Q5R1I0 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6d-4Q5R1I0 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.2□□□□□ -0.3
Trav6d-4Q5R1I0 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-4Q5R1I0 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-4Q5R1I0 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-4Q5R1I0 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-4Q5R1I0 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-4Q5R1I0 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-4Q5R1I0 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.2□□□□□ -0.3
Trav6d-4Q5R1I0 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-4Q5R1I0 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-4Q5R1I0 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-4Q5R1I0 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trav6d-4Q5R1I0 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trav6d-4Q5R1I0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav6d-4Q5R1I0 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trav6d-4Q5R1I0 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav6d-4Q5R1I0 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-4Q5R1I0 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-4Q5R1I0 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Trav6d-4Q5R1I0 Gm12350-201ENSMUST00000121208 462 ntBASIC13.2□□□□□ -0.3
Trav6d-4Q5R1I0 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-4Q5R1I0 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-4Q5R1I0 Mir5126-201ENSMUST00000175513 77 ntBASIC13.2□□□□□ -0.3
Trav6d-4Q5R1I0 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.2□□□□□ -0.3
Trav6d-4Q5R1I0 AV026068-213ENSMUST00000223675 1171 ntBASIC13.2□□□□□ -0.3
Trav6d-4Q5R1I0 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.2□□□□□ -0.3
Trav6d-4Q5R1I0 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Trav6d-4Q5R1I0 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-4Q5R1I0 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-4Q5R1I0 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-4Q5R1I0 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-4Q5R1I0 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-4Q5R1I0 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-4Q5R1I0 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav6d-4Q5R1I0 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-4Q5R1I0 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Trav6d-4Q5R1I0 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-4Q5R1I0 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-4Q5R1I0 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-4Q5R1I0 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav6d-4Q5R1I0 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-4Q5R1I0 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-4Q5R1I0 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-4Q5R1I0 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-4Q5R1I0 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-4Q5R1I0 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-4Q5R1I0 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-4Q5R1I0 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav6d-4Q5R1I0 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-4Q5R1I0 Gm19164-201ENSMUST00000210667 640 ntBASIC13.19□□□□□ -0.3
Trav6d-4Q5R1I0 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav6d-4Q5R1I0 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-4Q5R1I0 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-4Q5R1I0 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-4Q5R1I0 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-4Q5R1I0 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-4Q5R1I0 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.19□□□□□ -0.3
Trav6d-4Q5R1I0 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-4Q5R1I0 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms