Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Gm16061-201ENSMUST00000122167 857 ntBASIC12.95□□□□□ -0.34
Trav8d-1Q5R1H8 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav8d-1Q5R1H8 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav8d-1Q5R1H8 Gm18959-201ENSMUST00000208954 655 ntBASIC12.95□□□□□ -0.34
Trav8d-1Q5R1H8 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav8d-1Q5R1H8 Gm7791-201ENSMUST00000219066 539 ntBASIC12.95□□□□□ -0.34
Trav8d-1Q5R1H8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav8d-1Q5R1H8 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav8d-1Q5R1H8 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav8d-1Q5R1H8 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav8d-1Q5R1H8 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav8d-1Q5R1H8 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.95□□□□□ -0.34
Trav8d-1Q5R1H8 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav8d-1Q5R1H8 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav8d-1Q5R1H8 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav8d-1Q5R1H8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav8d-1Q5R1H8 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav8d-1Q5R1H8 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav8d-1Q5R1H8 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav8d-1Q5R1H8 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav8d-1Q5R1H8 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav8d-1Q5R1H8 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav8d-1Q5R1H8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav8d-1Q5R1H8 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav8d-1Q5R1H8 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav8d-1Q5R1H8 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav8d-1Q5R1H8 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav8d-1Q5R1H8 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.94□□□□□ -0.34
Trav8d-1Q5R1H8 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav8d-1Q5R1H8 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav8d-1Q5R1H8 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav8d-1Q5R1H8 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav8d-1Q5R1H8 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav8d-1Q5R1H8 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav8d-1Q5R1H8 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav8d-1Q5R1H8 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav8d-1Q5R1H8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav8d-1Q5R1H8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav8d-1Q5R1H8 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.94□□□□□ -0.34
Trav8d-1Q5R1H8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav8d-1Q5R1H8 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav8d-1Q5R1H8 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav8d-1Q5R1H8 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav8d-1Q5R1H8 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav8d-1Q5R1H8 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav8d-1Q5R1H8 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav8d-1Q5R1H8 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav8d-1Q5R1H8 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Trav8d-1Q5R1H8 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav8d-1Q5R1H8 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav8d-1Q5R1H8 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav8d-1Q5R1H8 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav8d-1Q5R1H8 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav8d-1Q5R1H8 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav8d-1Q5R1H8 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trav8d-1Q5R1H8 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav8d-1Q5R1H8 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav8d-1Q5R1H8 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav8d-1Q5R1H8 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trav8d-1Q5R1H8 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav8d-1Q5R1H8 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
Trav8d-1Q5R1H8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav8d-1Q5R1H8 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.93□□□□□ -0.34
Trav8d-1Q5R1H8 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav8d-1Q5R1H8 Gm18958-201ENSMUST00000174258 762 ntBASIC12.93□□□□□ -0.34
Trav8d-1Q5R1H8 Gm27000-201ENSMUST00000182943 842 ntBASIC12.93□□□□□ -0.34
Trav8d-1Q5R1H8 Gm7889-201ENSMUST00000185591 958 ntBASIC12.93□□□□□ -0.34
Trav8d-1Q5R1H8 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav8d-1Q5R1H8 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav8d-1Q5R1H8 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav8d-1Q5R1H8 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav8d-1Q5R1H8 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav8d-1Q5R1H8 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.93□□□□□ -0.34
Trav8d-1Q5R1H8 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav8d-1Q5R1H8 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav8d-1Q5R1H8 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav8d-1Q5R1H8 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav8d-1Q5R1H8 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav8d-1Q5R1H8 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav8d-1Q5R1H8 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav8d-1Q5R1H8 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav8d-1Q5R1H8 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav8d-1Q5R1H8 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav8d-1Q5R1H8 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav8d-1Q5R1H8 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav8d-1Q5R1H8 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.92□□□□□ -0.34
Trav8d-1Q5R1H8 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav8d-1Q5R1H8 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav8d-1Q5R1H8 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav8d-1Q5R1H8 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav8d-1Q5R1H8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav8d-1Q5R1H8 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav8d-1Q5R1H8 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav8d-1Q5R1H8 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav8d-1Q5R1H8 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav8d-1Q5R1H8 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav8d-1Q5R1H8 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav8d-1Q5R1H8 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav8d-1Q5R1H8 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav8d-1Q5R1H8 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms