Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5d-4Q5R1F6 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Trav5d-4Q5R1F6 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.56□□□□□ -0.24
Trav5d-4Q5R1F6 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5d-4Q5R1F6 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5d-4Q5R1F6 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5d-4Q5R1F6 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5d-4Q5R1F6 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav5d-4Q5R1F6 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5d-4Q5R1F6 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5d-4Q5R1F6 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5d-4Q5R1F6 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5d-4Q5R1F6 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5d-4Q5R1F6 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.55□□□□□ -0.24
Trav5d-4Q5R1F6 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5d-4Q5R1F6 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5d-4Q5R1F6 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5d-4Q5R1F6 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5d-4Q5R1F6 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Trav5d-4Q5R1F6 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5d-4Q5R1F6 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5d-4Q5R1F6 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5d-4Q5R1F6 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5d-4Q5R1F6 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5d-4Q5R1F6 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trav5d-4Q5R1F6 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trav5d-4Q5R1F6 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5d-4Q5R1F6 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5d-4Q5R1F6 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5d-4Q5R1F6 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5d-4Q5R1F6 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5d-4Q5R1F6 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Trav5d-4Q5R1F6 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5d-4Q5R1F6 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5d-4Q5R1F6 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5d-4Q5R1F6 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav5d-4Q5R1F6 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5d-4Q5R1F6 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav5d-4Q5R1F6 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5d-4Q5R1F6 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5d-4Q5R1F6 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5d-4Q5R1F6 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5d-4Q5R1F6 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5d-4Q5R1F6 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5d-4Q5R1F6 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5d-4Q5R1F6 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5d-4Q5R1F6 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav5d-4Q5R1F6 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5d-4Q5R1F6 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5d-4Q5R1F6 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5d-4Q5R1F6 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5d-4Q5R1F6 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5d-4Q5R1F6 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5d-4Q5R1F6 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav5d-4Q5R1F6 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav5d-4Q5R1F6 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms