Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC12.28□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.28□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.27□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.27□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.27□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.27□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.27□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.27□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Mir1199-201ENSMUST00000117015 119 ntBASIC12.27□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Gm27463-201ENSMUST00000183569 57 ntBASIC12.27□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 AC135637.1-201ENSMUST00000227750 365 ntBASIC12.27□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.27□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 BC037039-201ENSMUST00000192003 2205 ntBASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms