Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rc3h1Q4VGL6 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rc3h1Q4VGL6 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Rc3h1Q4VGL6 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.16■□□□□ 0.5
Rc3h1Q4VGL6 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rc3h1Q4VGL6 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rc3h1Q4VGL6 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rc3h1Q4VGL6 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rc3h1Q4VGL6 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rc3h1Q4VGL6 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Rc3h1Q4VGL6 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.15■□□□□ 0.5
Rc3h1Q4VGL6 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rc3h1Q4VGL6 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rc3h1Q4VGL6 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rc3h1Q4VGL6 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rc3h1Q4VGL6 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rc3h1Q4VGL6 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rc3h1Q4VGL6 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rc3h1Q4VGL6 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rc3h1Q4VGL6 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rc3h1Q4VGL6 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Rc3h1Q4VGL6 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rc3h1Q4VGL6 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.15■□□□□ 0.5
Rc3h1Q4VGL6 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC18.15■□□□□ 0.5
Rc3h1Q4VGL6 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rc3h1Q4VGL6 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18.15■□□□□ 0.5
Rc3h1Q4VGL6 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.15■□□□□ 0.5
Rc3h1Q4VGL6 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Rc3h1Q4VGL6 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rc3h1Q4VGL6 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rc3h1Q4VGL6 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rc3h1Q4VGL6 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rc3h1Q4VGL6 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rc3h1Q4VGL6 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rc3h1Q4VGL6 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rc3h1Q4VGL6 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rc3h1Q4VGL6 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Rc3h1Q4VGL6 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rc3h1Q4VGL6 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.14■□□□□ 0.5
Rc3h1Q4VGL6 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Rc3h1Q4VGL6 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rc3h1Q4VGL6 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rc3h1Q4VGL6 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rc3h1Q4VGL6 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rc3h1Q4VGL6 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rc3h1Q4VGL6 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Rc3h1Q4VGL6 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rc3h1Q4VGL6 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rc3h1Q4VGL6 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rc3h1Q4VGL6 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rc3h1Q4VGL6 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC18.14■□□□□ 0.49
Rc3h1Q4VGL6 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rc3h1Q4VGL6 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rc3h1Q4VGL6 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.14■□□□□ 0.49
Rc3h1Q4VGL6 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC18.14■□□□□ 0.49
Rc3h1Q4VGL6 Gm27300-201ENSMUST00000184085 97 ntBASIC18.14■□□□□ 0.49
Rc3h1Q4VGL6 Gm27335-201ENSMUST00000184758 97 ntBASIC18.14■□□□□ 0.49
Rc3h1Q4VGL6 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Rc3h1Q4VGL6 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rc3h1Q4VGL6 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.14■□□□□ 0.49
Rc3h1Q4VGL6 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.14■□□□□ 0.49
Rc3h1Q4VGL6 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rc3h1Q4VGL6 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rc3h1Q4VGL6 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Rc3h1Q4VGL6 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rc3h1Q4VGL6 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rc3h1Q4VGL6 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rc3h1Q4VGL6 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rc3h1Q4VGL6 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rc3h1Q4VGL6 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.13■□□□□ 0.49
Rc3h1Q4VGL6 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rc3h1Q4VGL6 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rc3h1Q4VGL6 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rc3h1Q4VGL6 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rc3h1Q4VGL6 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rc3h1Q4VGL6 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rc3h1Q4VGL6 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.13■□□□□ 0.49
Rc3h1Q4VGL6 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rc3h1Q4VGL6 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Rc3h1Q4VGL6 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rc3h1Q4VGL6 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rc3h1Q4VGL6 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Rc3h1Q4VGL6 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.13■□□□□ 0.49
Rc3h1Q4VGL6 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rc3h1Q4VGL6 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rc3h1Q4VGL6 Gm37935-201ENSMUST00000192012 982 ntBASIC18.13■□□□□ 0.49
Rc3h1Q4VGL6 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC18.13■□□□□ 0.49
Rc3h1Q4VGL6 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.13■□□□□ 0.49
Rc3h1Q4VGL6 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rc3h1Q4VGL6 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rc3h1Q4VGL6 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rc3h1Q4VGL6 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rc3h1Q4VGL6 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rc3h1Q4VGL6 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rc3h1Q4VGL6 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rc3h1Q4VGL6 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rc3h1Q4VGL6 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rc3h1Q4VGL6 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rc3h1Q4VGL6 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Rc3h1Q4VGL6 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms