Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Trim40Q3UWA4 Gm10653-202ENSMUST00000139570 835 ntBASIC14.82□□□□□ -0.04
Trim40Q3UWA4 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim40Q3UWA4 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim40Q3UWA4 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Trim40Q3UWA4 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim40Q3UWA4 Gm7791-201ENSMUST00000219066 539 ntBASIC14.82□□□□□ -0.04
Trim40Q3UWA4 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim40Q3UWA4 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.82□□□□□ -0.04
Trim40Q3UWA4 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim40Q3UWA4 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim40Q3UWA4 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim40Q3UWA4 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim40Q3UWA4 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim40Q3UWA4 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim40Q3UWA4 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.82□□□□□ -0.04
Trim40Q3UWA4 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim40Q3UWA4 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim40Q3UWA4 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim40Q3UWA4 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim40Q3UWA4 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim40Q3UWA4 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim40Q3UWA4 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim40Q3UWA4 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim40Q3UWA4 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim40Q3UWA4 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim40Q3UWA4 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Trim40Q3UWA4 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.81□□□□□ -0.04
Trim40Q3UWA4 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.81□□□□□ -0.04
Trim40Q3UWA4 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim40Q3UWA4 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim40Q3UWA4 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.81□□□□□ -0.04
Trim40Q3UWA4 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim40Q3UWA4 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trim40Q3UWA4 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trim40Q3UWA4 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Trim40Q3UWA4 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim40Q3UWA4 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim40Q3UWA4 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trim40Q3UWA4 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim40Q3UWA4 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.81□□□□□ -0.04
Trim40Q3UWA4 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim40Q3UWA4 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim40Q3UWA4 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim40Q3UWA4 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trim40Q3UWA4 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim40Q3UWA4 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim40Q3UWA4 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim40Q3UWA4 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim40Q3UWA4 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim40Q3UWA4 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Trim40Q3UWA4 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim40Q3UWA4 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim40Q3UWA4 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
Trim40Q3UWA4 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim40Q3UWA4 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.8□□□□□ -0.04
Trim40Q3UWA4 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim40Q3UWA4 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.8□□□□□ -0.04
Trim40Q3UWA4 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.8□□□□□ -0.04
Trim40Q3UWA4 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim40Q3UWA4 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim40Q3UWA4 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim40Q3UWA4 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim40Q3UWA4 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.8□□□□□ -0.04
Trim40Q3UWA4 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim40Q3UWA4 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim40Q3UWA4 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim40Q3UWA4 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim40Q3UWA4 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim40Q3UWA4 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trim40Q3UWA4 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim40Q3UWA4 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim40Q3UWA4 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim40Q3UWA4 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Trim40Q3UWA4 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim40Q3UWA4 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim40Q3UWA4 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim40Q3UWA4 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim40Q3UWA4 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim40Q3UWA4 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim40Q3UWA4 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.79□□□□□ -0.04
Trim40Q3UWA4 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim40Q3UWA4 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim40Q3UWA4 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trim40Q3UWA4 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim40Q3UWA4 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim40Q3UWA4 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim40Q3UWA4 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim40Q3UWA4 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim40Q3UWA4 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim40Q3UWA4 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Trim40Q3UWA4 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim40Q3UWA4 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Trim40Q3UWA4 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.79□□□□□ -0.04
Trim40Q3UWA4 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim40Q3UWA4 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim40Q3UWA4 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.79□□□□□ -0.04
Trim40Q3UWA4 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.79□□□□□ -0.04
Trim40Q3UWA4 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.79□□□□□ -0.04
Trim40Q3UWA4 Gm18115-201ENSMUST00000221209 621 ntBASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms