Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Spg11Q3UHA3 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Spg11Q3UHA3 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Spg11Q3UHA3 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.44□□□□□ -0.1
Spg11Q3UHA3 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Spg11Q3UHA3 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Spg11Q3UHA3 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Spg11Q3UHA3 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Spg11Q3UHA3 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Spg11Q3UHA3 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Spg11Q3UHA3 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Spg11Q3UHA3 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Spg11Q3UHA3 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.43□□□□□ -0.1
Spg11Q3UHA3 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.43□□□□□ -0.1
Spg11Q3UHA3 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Spg11Q3UHA3 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.43□□□□□ -0.1
Spg11Q3UHA3 Gm42693-201ENSMUST00000196779 631 ntBASIC14.43□□□□□ -0.1
Spg11Q3UHA3 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Spg11Q3UHA3 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.43□□□□□ -0.1
Spg11Q3UHA3 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Spg11Q3UHA3 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Spg11Q3UHA3 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Spg11Q3UHA3 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Spg11Q3UHA3 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Spg11Q3UHA3 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.43□□□□□ -0.1
Spg11Q3UHA3 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Spg11Q3UHA3 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Spg11Q3UHA3 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Spg11Q3UHA3 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Spg11Q3UHA3 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Spg11Q3UHA3 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Spg11Q3UHA3 Gm10478-201ENSMUST00000084451 396 ntBASIC14.43□□□□□ -0.1
Spg11Q3UHA3 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Spg11Q3UHA3 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Spg11Q3UHA3 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Spg11Q3UHA3 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Spg11Q3UHA3 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Spg11Q3UHA3 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Spg11Q3UHA3 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Spg11Q3UHA3 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Spg11Q3UHA3 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Spg11Q3UHA3 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Spg11Q3UHA3 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Spg11Q3UHA3 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Spg11Q3UHA3 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Spg11Q3UHA3 Gm12091-201ENSMUST00000146791 830 ntBASIC14.42□□□□□ -0.1
Spg11Q3UHA3 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Spg11Q3UHA3 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC14.42□□□□□ -0.1
Spg11Q3UHA3 Gm43703-201ENSMUST00000200523 763 ntBASIC14.42□□□□□ -0.1
Spg11Q3UHA3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.42□□□□□ -0.1
Spg11Q3UHA3 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Spg11Q3UHA3 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Spg11Q3UHA3 Gm4875-201ENSMUST00000118257 786 ntBASIC14.42□□□□□ -0.1
Spg11Q3UHA3 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.42□□□□□ -0.1
Spg11Q3UHA3 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.42□□□□□ -0.1
Spg11Q3UHA3 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Spg11Q3UHA3 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.42□□□□□ -0.1
Spg11Q3UHA3 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Spg11Q3UHA3 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.42□□□□□ -0.1
Spg11Q3UHA3 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.42□□□□□ -0.1
Spg11Q3UHA3 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.42□□□□□ -0.1
Spg11Q3UHA3 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.42□□□□□ -0.1
Spg11Q3UHA3 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Spg11Q3UHA3 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Spg11Q3UHA3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Spg11Q3UHA3 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Spg11Q3UHA3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Spg11Q3UHA3 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Spg11Q3UHA3 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Spg11Q3UHA3 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.41□□□□□ -0.1
Spg11Q3UHA3 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.41□□□□□ -0.1
Spg11Q3UHA3 Gm45841-201ENSMUST00000207700 164 ntBASIC14.41□□□□□ -0.1
Spg11Q3UHA3 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Spg11Q3UHA3 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Spg11Q3UHA3 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Spg11Q3UHA3 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.41□□□□□ -0.1
Spg11Q3UHA3 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Spg11Q3UHA3 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Spg11Q3UHA3 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Spg11Q3UHA3 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Spg11Q3UHA3 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Spg11Q3UHA3 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.41□□□□□ -0.1
Spg11Q3UHA3 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.41□□□□□ -0.1
Spg11Q3UHA3 Shd-206ENSMUST00000225145 998 ntBASIC14.41□□□□□ -0.1
Spg11Q3UHA3 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC14.41□□□□□ -0.1
Spg11Q3UHA3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Spg11Q3UHA3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Spg11Q3UHA3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Spg11Q3UHA3 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Spg11Q3UHA3 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Spg11Q3UHA3 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Spg11Q3UHA3 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Spg11Q3UHA3 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Spg11Q3UHA3 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Spg11Q3UHA3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Spg11Q3UHA3 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Spg11Q3UHA3 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Spg11Q3UHA3 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Spg11Q3UHA3 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Spg11Q3UHA3 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms