Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col1a2Q01149 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col1a2Q01149 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col1a2Q01149 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col1a2Q01149 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col1a2Q01149 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col1a2Q01149 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC19.63■□□□□ 0.73
Col1a2Q01149 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC19.63■□□□□ 0.73
Col1a2Q01149 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col1a2Q01149 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC19.63■□□□□ 0.73
Col1a2Q01149 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col1a2Q01149 Gm42473-201ENSMUST00000201056 2291 ntBASIC19.63■□□□□ 0.73
Col1a2Q01149 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col1a2Q01149 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col1a2Q01149 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col1a2Q01149 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col1a2Q01149 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Col1a2Q01149 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col1a2Q01149 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col1a2Q01149 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Col1a2Q01149 AC157650.3-201ENSMUST00000225058 1476 ntBASIC19.62■□□□□ 0.73
Col1a2Q01149 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col1a2Q01149 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC19.62■□□□□ 0.73
Col1a2Q01149 Gm25925-201ENSMUST00000158314 306 ntBASIC19.62■□□□□ 0.73
Col1a2Q01149 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC19.62■□□□□ 0.73
Col1a2Q01149 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col1a2Q01149 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC19.62■□□□□ 0.73
Col1a2Q01149 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col1a2Q01149 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Col1a2Q01149 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col1a2Q01149 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col1a2Q01149 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Col1a2Q01149 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col1a2Q01149 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col1a2Q01149 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col1a2Q01149 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col1a2Q01149 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col1a2Q01149 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col1a2Q01149 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col1a2Q01149 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col1a2Q01149 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col1a2Q01149 Gm12892-201ENSMUST00000117367 1146 ntBASIC19.61■□□□□ 0.73
Col1a2Q01149 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Col1a2Q01149 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col1a2Q01149 AC124549.3-201ENSMUST00000225541 367 ntBASIC19.61■□□□□ 0.73
Col1a2Q01149 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col1a2Q01149 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col1a2Q01149 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col1a2Q01149 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col1a2Q01149 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col1a2Q01149 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col1a2Q01149 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col1a2Q01149 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col1a2Q01149 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col1a2Q01149 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Col1a2Q01149 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col1a2Q01149 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col1a2Q01149 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col1a2Q01149 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col1a2Q01149 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col1a2Q01149 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col1a2Q01149 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col1a2Q01149 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Col1a2Q01149 Mir7036b-201ENSMUST00000184791 63 ntBASIC19.6■□□□□ 0.73
Col1a2Q01149 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Col1a2Q01149 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col1a2Q01149 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Col1a2Q01149 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Col1a2Q01149 Gm29361-201ENSMUST00000183323 2000 ntBASIC19.6■□□□□ 0.73
Col1a2Q01149 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col1a2Q01149 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col1a2Q01149 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col1a2Q01149 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
Col1a2Q01149 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC19.59■□□□□ 0.73
Col1a2Q01149 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col1a2Q01149 Gm17271-201ENSMUST00000165535 355 ntBASIC19.59■□□□□ 0.73
Col1a2Q01149 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC19.59■□□□□ 0.73
Col1a2Q01149 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col1a2Q01149 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col1a2Q01149 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Col1a2Q01149 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col1a2Q01149 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col1a2Q01149 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col1a2Q01149 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col1a2Q01149 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC19.59■□□□□ 0.73
Col1a2Q01149 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC19.59■□□□□ 0.73
Col1a2Q01149 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col1a2Q01149 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col1a2Q01149 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Col1a2Q01149 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col1a2Q01149 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Col1a2Q01149 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col1a2Q01149 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col1a2Q01149 Gm15427-201ENSMUST00000117288 531 ntBASIC19.58■□□□□ 0.73
Col1a2Q01149 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC19.58■□□□□ 0.73
Col1a2Q01149 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC19.58■□□□□ 0.73
Col1a2Q01149 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Col1a2Q01149 Gm19430-201ENSMUST00000193847 2137 ntBASIC19.58■□□□□ 0.73
Col1a2Q01149 Thap2-203ENSMUST00000218989 527 ntBASIC19.58■□□□□ 0.73
Col1a2Q01149 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms