Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.25□□□□□ -0.29
Npas1P97459 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Npas1P97459 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Npas1P97459 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Npas1P97459 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Npas1P97459 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Npas1P97459 Gm12441-201ENSMUST00000121806 588 ntBASIC13.25□□□□□ -0.29
Npas1P97459 Gm38027-201ENSMUST00000192315 235 ntBASIC13.25□□□□□ -0.29
Npas1P97459 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.25□□□□□ -0.29
Npas1P97459 Il3ra-202ENSMUST00000223589 738 ntBASIC13.25□□□□□ -0.29
Npas1P97459 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Npas1P97459 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Npas1P97459 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Npas1P97459 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Npas1P97459 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Npas1P97459 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Npas1P97459 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Npas1P97459 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Npas1P97459 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Npas1P97459 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Npas1P97459 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Npas1P97459 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Npas1P97459 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Npas1P97459 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Npas1P97459 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Npas1P97459 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Npas1P97459 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Npas1P97459 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Npas1P97459 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Npas1P97459 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Npas1P97459 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Npas1P97459 Gm5643-201ENSMUST00000117081 966 ntBASIC13.24□□□□□ -0.29
Npas1P97459 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Npas1P97459 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Npas1P97459 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.24□□□□□ -0.29
Npas1P97459 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.24□□□□□ -0.29
Npas1P97459 Gm5297-201ENSMUST00000198555 1171 ntBASIC13.24□□□□□ -0.29
Npas1P97459 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.24□□□□□ -0.29
Npas1P97459 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Npas1P97459 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Npas1P97459 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Npas1P97459 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Npas1P97459 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.24□□□□□ -0.29
Npas1P97459 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Npas1P97459 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Npas1P97459 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Npas1P97459 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Npas1P97459 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Npas1P97459 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Npas1P97459 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Npas1P97459 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Npas1P97459 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Npas1P97459 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Npas1P97459 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Npas1P97459 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Npas1P97459 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Npas1P97459 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.23□□□□□ -0.29
Npas1P97459 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC13.23□□□□□ -0.29
Npas1P97459 Gm7791-201ENSMUST00000219066 539 ntBASIC13.23□□□□□ -0.29
Npas1P97459 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.23□□□□□ -0.29
Npas1P97459 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Npas1P97459 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Npas1P97459 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Npas1P97459 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Npas1P97459 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Npas1P97459 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Npas1P97459 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Npas1P97459 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Npas1P97459 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Npas1P97459 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Npas1P97459 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Npas1P97459 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Npas1P97459 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Npas1P97459 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Npas1P97459 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Npas1P97459 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Npas1P97459 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npas1P97459 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npas1P97459 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npas1P97459 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npas1P97459 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npas1P97459 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Npas1P97459 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npas1P97459 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Npas1P97459 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Npas1P97459 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.22□□□□□ -0.29
Npas1P97459 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.22□□□□□ -0.29
Npas1P97459 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npas1P97459 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npas1P97459 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npas1P97459 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npas1P97459 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Npas1P97459 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Npas1P97459 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npas1P97459 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npas1P97459 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npas1P97459 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npas1P97459 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npas1P97459 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npas1P97459 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms